RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Srebf2Q3U1N2 1130 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kcna5Q61762 602 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dennd2cQ6P9P8 914 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Armc12Q80X86 340 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dyrk4Q8BI55 632 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Iars2Q8BIJ6 1012 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Olfr1499Q8VG65 314 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 MutyhQ99P21 515 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Prl2b1Q9DAZ2 228 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 ThegQ9JMB1 375 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Btg4O70552 250 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 WapP01173 134 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pola2P33611 600 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Myl2P51667 166 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Q8C1R3 189 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kdm4bQ91VY5 1086 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Synpo2Q91YE8 1087 aaKnown RBP12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ears2Q9CXJ1 523 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pnldc1B2RXZ1 531 aa12.27□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Robo4Q8C310 1012 aa12.27□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Trim7Q923T7 510 aa12.27□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kcnq4Q9JK97 696 aa12.27□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cylc2B1AWN8 422 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gm43302L7N1X8 611 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 CblP22682 913 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Crabp2P22935 138 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gbp10Q000W5 611 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Inf2Q0GNC1 1273 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sppl2bQ3TD49 578 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Hipk4Q3V016 616 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Azin2Q8BVM4 459 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cd300ldQ8VCH2 221 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Xpo6Q924Z6 1125 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Astn1Q61137 1302 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Rsrc2A2RTL5 376 aaKnown RBP12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sec22bO08547 215 aaKnown RBP12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Dedd2Q8QZV0 330 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Trpm8Q8R4D5 1104 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tfap2dQ91ZK0 452 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Trim12aQ99PQ1 284 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Vps28Q9D1C8 221 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pdcd7Q9WTY1 482 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Apba1B2RUJ5 842 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Vmn2r39L7N2E5 861 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Stx3Q64704 289 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zdhhc14Q8BQQ1 489 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Kctd2Q8CEZ0 266 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Fgd4Q91ZT5 766 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Map3k6Q9WTR2 1291 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Apobec2Q9WV35 224 aa12.27□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Nek2O35942 443 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ankmy2Q3TPE9 440 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Dab2ipQ3UHC7 1189 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Itih3Q61704 889 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cyp2c70Q91W64 489 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Klc4Q9DBS5 619 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 TubP50586 505 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gas1Q01721 343 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Stt3bQ3TDQ1 823 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Aldh1a2Q62148 518 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Setd6Q9CWY3 473 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tubgcp4Q9D4F8 667 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Nccrp1G3X9C2 266 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Adcy6Q01341 1165 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Dennd1bQ3U1T9 766 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zmym5Q3U2E2 627 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Mrgprx2Q3UG50 352 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 XpaQ64267 272 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Slc9b1Q8C0X2 565 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cep57Q8CEE0 500 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Vps37aQ8CHS8 397 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zdhhc12Q8VC90 267 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Rnf135Q9CWS1 417 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Smok2bQ9QYZ3 484 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Smok2aQ9QYZ6 504 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tnfsf13bQ9WU72 309 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gm5485A0A1D5RM98 91 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 MylpfP97457 169 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Epb41l5Q8BGS1 731 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Slc9a9Q8BZ00 644 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Rps6kl1Q8R2S1 544 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Uap1Q91YN5 522 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Eps8l2Q99K30 729 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Hars2Q99KK9 505 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pcdh7A0A0A6YY83 1255 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Patl2A2ARM1 529 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pcdh9F8VPK8 1237 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Man1a1P45700 655 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Adamts10P58459 1104 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Trim43bP86448 445 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Agxt2Q3UEG6 513 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Fastkd1Q6DI86 829 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gpr156Q6PCP7 798 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gtf3c4Q8BMQ2 817 aaKnown RBP12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Calhm4Q8CE93 315 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Kctd15Q8K0E1 283 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Adi1Q99JT9 179 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 IkbkeQ9R0T8 717 aa12.26□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pds5aQ6A026 1332 aa12.25□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gjb1P28230 283 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms