RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Aldh4a1Q8CHT0 562 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tspan14Q8QZY6 270 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Nup85Q8R480 656 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 GatbQ99JT1 557 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Chchd3Q9CRB9 227 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Usp21Q9QZL6 566 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tll2Q9WVM6 1012 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 XdhQ00519 1335 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Iqsec2Q5DU25 1478 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mmp13P33435 472 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Elk3P41971 409 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Nlrp9cQ66X01 1004 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 HpseQ6YGZ1 535 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kcnt1Q6ZPR4 1224 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 DarsQ922B2 501 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Prmt7Q922X9 692 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vmp1Q99KU0 406 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Serbp1Q9CY58 407 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Stx11Q9D3G5 287 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ror1Q9Z139 937 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vmn2r7E9PYL5 915 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vmn2r3H3BJ88 915 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vmn2r6H3BK29 913 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Prl2c2P04095 224 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 NrlP54846 237 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pgm5Q8BZF8 567 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pdk3Q922H2 415 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ptdss1Q99LH2 473 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ddit4Q9D3F7 229 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Arih2Q9Z1K6 492 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Krt6bQ9Z331 562 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tecpr2Q3UH45 1423 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Foxn2E9Q7L6 429 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Slc27a6E9Q9W4 619 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Speer4cG3UXD1 256 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm10354K7N6A0 256 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 BrafP28028 804 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tmprss15P97435 1069 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tmem154Q8C4Q9 181 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 E2f4Q8R0K9 410 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cdc16Q8R349 620 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fis1Q9CQ92 152 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sfmbt1Q9JMD1 863 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 PfasQ5SUR0 1337 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm5930D3Z257 264 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tekt5G5E8A8 557 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 IapP03975 557 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 HpcaP84075 193 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 RelaQ04207 549 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Aars2Q14CH7 980 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 GmpsQ3THK7 693 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vars2Q3U2A8 1060 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 MyrfQ3UR85 1138 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dpysl3Q62188 570 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Znf569Q80W31 679 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 FsbpQ8BKE5 299 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Usp20Q8C6M1 916 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sgms1Q8VCQ6 419 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lztr1Q9CQ33 837 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Timm50Q9D880 353 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm21083A0A0G2JFD5 256 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ripor3A1L3T7 938 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3095E9Q058 166 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pcdh9F8VPK8 1237 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hk2O08528 917 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 FdxrQ61578 494 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 GpamQ61586 827 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Naif1Q6PFD7 327 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fam227bQ9D518 532 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tmx2Q9D710 295 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Poc5Q9DBS8 558 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm7694J3QNH8 270 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Magea6O89010 325 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Smyd1P97443 490 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Magea3Q6T340 320 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Moxd2Q7TT41 619 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Smim11aQ99J19 55 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cdyl2Q9D5D8 503 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hormad1Q9D5T7 392 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Serpinb9bQ9DAV6 377 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olig1Q9JKN5 260 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sbno2Q7TNB8 1349 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zcchc7B1AX39 541 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tada2bD3Z4Z0 420 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr743L7N1Y2 311 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 InvsO89019 1062 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ptpn11P35235 597 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Igfbp6P47880 238 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Snai1Q02085 264 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm5431Q5NCB3 844 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tbx2Q60707 711 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zfyve28Q6ZPK7 905 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Slc20a2Q80UP8 656 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Q8BGC1 442 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 AgpsQ8C0I1 645 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Q8CC96 669 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sh3kbp1Q8R550 709 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fam32aQ9CR80 112 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tbx20Q9ES03 445 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hecw2Q6I6G8 1578 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms