RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 TankP70347 448 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cdh9P70407 786 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Mtf2Q02395 593 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cd244Q07763 397 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Ccdc162pQ0VG85 912 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Fam92bQ3V2J0 292 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Papss1Q60967 624 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Acvrl1Q61288 502 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Arnt2Q61324 712 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Krt15Q61414 452 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Tdpoz2Q717B2 364 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Clec2eQ80XD9 204 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Necab1Q8BG18 352 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Znf276Q8CE64 614 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Mill2Q8HWE5 355 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Atat1Q8K341 421 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Vmn1r188Q8K3N2 308 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 BbxQ8VBW5 907 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cbwd1Q8VEH6 393 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Twf1Q91YR1 350 aaKnown RBP11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 HgsQ99LI8 775 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Lrrc17Q9CXD9 443 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Sertad2Q9JJG5 309 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Elf4Q9Z2U4 655 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cep295Q8BQ48 2412 aa11.92□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Lcn6A2AJB9 181 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 DgkdE9PUQ8 1220 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cdh18E9Q9Q6 790 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Grip2G3XA20 1042 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cdc25cP48967 447 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Rhox5P52651 210 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Fermt1P59113 677 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Q3UE31 404 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Gpr19Q61121 415 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Ovgp1Q62010 721 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Heatr6Q6P1G0 1184 aaKnown RBP11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Mgat5bQ765H6 792 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Olfr26Q7TRB7 308 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Mib1Q80SY4 1006 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 C2cd2lQ80X80 706 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Q80ZQ3 298 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Pi15Q8BS03 258 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 NemfQ8CCP0 1064 aaKnown RBP11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Nol6Q8R5K4 1152 aaKnown RBP11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Slc5a9Q8VDT1 685 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Creb3l3Q91XE9 479 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Mettl13Q91YR5 698 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 NonoQ99K48 473 aaKnown RBP11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 SdhbQ9CQA3 282 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cul2Q9D4H8 745 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Olfr933Q9EQA0 308 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Ptgdr2Q9Z2J6 382 aa11.91□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 CtssO70370 340 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Fcgr1P26151 404 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Gabrb2P63137 512 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Wbp1P97764 304 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Smarcad1Q04692 1021 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Agap2Q3UHD9 1186 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Msi1Q61474 362 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Pacsin1Q61644 441 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Creb3Q61817 404 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 NntQ61941 1086 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Nop9Q8BMC4 636 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Q8BZE1 841 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cstf2tQ8C7E9 632 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Gm13199Q8C8E0 125 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Bicdl2Q8CHW5 507 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Brd3Q8K2F0 726 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Dnttip2Q8R2M2 758 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Gramd1aQ8VEF1 722 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Usp3Q91W36 520 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Cyp2c70Q91W64 489 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Rpa3Q9CQ71 121 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 AticQ9CWJ9 592 aaKnown RBP11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 4930578G10RikQ9D4Q4 153 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Znf394Q9Z1D9 521 aa11.9□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Zbtb11G5E8B9 1050 aaKnown RBP11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Gm7694J3QNH8 270 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Pias3O54714 628 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Mybpc3O70468 1270 aaKnown RBP11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Usp2O88623 613 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Nr3c1P06537 783 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Klf1P46099 358 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tead2P48301 445 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 CebpzP53569 1052 aaKnown RBP11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 RalaP63321 206 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Stt3bQ3TDQ1 823 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Zbtb16Q3UQ17 673 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Lrig2Q52KR2 1054 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 SpdyaQ5IBH7 310 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 MslnQ61468 625 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Sema5aQ62217 1077 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Ggnbp1Q6K1E7 370 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Adat2Q6P6J0 191 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 AtminQ6P9S1 818 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Adam29Q811Q4 763 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Noc4lQ8BHY2 516 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Arl14epQ8BIX3 276 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Anapc5Q8BTZ4 740 aa11.89□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Efl1Q8C0D5 1127 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms