RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 PrkciQ62074 595 aaKnown RBP17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 SnrpaQ62189 287 aaKnown RBP17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Htr1aQ64264 421 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Sap130Q8BIH0 1057 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pdik1lQ8QZR7 341 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Dnmt3cP0DOY1 709 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 SftpbP50405 377 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 PolgP54099 1218 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cyp2j11Q3UNV2 504 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 CochQ62507 552 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Aph1bQ8C7N7 257 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Necab2Q91ZP9 389 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ttc30bQ9CY00 664 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pgm3Q9CYR6 542 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Vwa7Q9JHA8 891 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Trpm5Q9JJH7 1158 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 ChkaO54804 453 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gabrb3P63080 473 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 MyrfQ3UR85 1138 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Nxpe4Q52KP5 543 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gdpd5Q640M6 607 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Sugp2Q8CH09 1067 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tasp1Q8R1G1 420 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Slc25a3Q8VEM8 357 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Rbm5Q91YE7 815 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 ProzQ9CQW3 399 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cnot11Q9CWN7 505 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Rassf7Q9DD19 359 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 TfebQ9R210 475 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cldn24D3YXJ9 220 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tars2Q3UQ84 723 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gpr151Q7TSN6 422 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Wwp1Q8BZZ3 918 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Emilin2Q8K482 1074 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Sh3pxd2bA2AAY5 908 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Olfr247E9PVJ7 320 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Olfr819K7N727 320 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gria2P23819 883 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Yy2Q3TTC2 378 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cmpk2Q3U5Q7 447 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gxylt1Q3UHH8 404 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Slc10a5Q5PT54 434 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Acvrl1Q61288 502 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Zfyve28Q6ZPK7 905 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ipo5Q8BKC5 1097 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mettl21cQ8BLU2 248 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tmtc3Q8BRH0 920 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Slc35b4Q8CIA5 331 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Commd10Q8JZY2 202 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ddx56Q9D0R4 546 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Chst7Q9EP78 484 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Dkc1Q9ESX5 509 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tdp2Q9JJX7 370 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Stap1Q9JM90 297 aaKnown RBP17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Rnf11Q9QYK7 154 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Fiz1Q9WTJ4 500 aa17.47■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Olfr600E9PUN7 314 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Slc1a6O35544 561 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ptk2P34152 1090 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Il12bP43432 335 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Aldh1a2Q62148 518 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pqlc1Q80XM9 271 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pnma1Q8C1C8 353 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Trex1Q91XB0 314 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Upk1aQ9D132 257 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Smim23Q9DAL0 136 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pdzd4Q9QY39 772 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Grin3aA2AIR5 1135 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gnao1P18872 354 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pou6f1Q07916 301 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Spdye4aQ5IBH6 268 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Fcrl5Q68SN8 596 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Il36gQ8R460 164 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Atg7Q9D906 698 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pck1Q9Z2V4 622 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Vmn2r25W4VSP2 855 aa17.46■□□□□ 0.39
Ctcf-201ENSMUST00000005841 NuggcD3YWJ0 796 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cyp2t4E9PWV0 503 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gm15448F6PZL4 682 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Zfy2P20662 777 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Kir3dl1P83555 432 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ccndbp1Q3TVC7 356 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nlrc4Q3UP24 1024 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Abhd10Q6PE15 297 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ston2Q8BZ60 895 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 NelfcdQ922L6 591 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 CabyrQ9D424 453 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Plcg1Q62077 1302 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Smyd1P97443 490 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Alkbh5Q3TSG4 395 aaKnown RBP17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 RgnQ64374 299 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr798Q7TRH8 311 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr293Q7TS10 336 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr615Q8VGY4 313 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pomgnt1Q91X88 660 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Commd8Q9CZG3 183 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mxra7Q9CZH7 178 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Psrc1Q9D0P7 329 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Noxred1Q9D3S5 366 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ankfn1A0A140LIW7 1083 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms