RNA–Protein interactions for RNA: YOR193W

PEX27, Transcript of Peripheral peroxisomal membrane protein, yeastyeast

Gene PEX27, Length 1,131 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX27YOR193W YOR008C-AQ3E7B9 74 aa0.33□□□□□ -2.36
PEX27YOR193W TOS6P48560 102 aa0.32□□□□□ -2.36
PEX27YOR193W YBR230W-AQ3E762 66 aa0.31□□□□□ -2.36
PEX27YOR193W YGR146C-AQ8TGT9 53 aa0.3□□□□□ -2.36
PEX27YOR193W THO2P53552 1597 aaKnown RBP0.3□□□□□ -2.36
PEX27YOR193W RKR1Q04781 1562 aa0.3□□□□□ -2.36
PEX27YOR193W STU1P38198 1513 aa0.29□□□□□ -2.36
PEX27YOR193W YPR010C-AA5Z2X5 72 aa0.28□□□□□ -2.36
PEX27YOR193W YLL006W-AQ3E814 58 aa0.28□□□□□ -2.36
PEX27YOR193W NUP170P38181 1502 aa0.26□□□□□ -2.37
PEX27YOR193W FIG2P25653 1609 aa0.26□□□□□ -2.37
PEX27YOR193W ATG2P53855 1592 aa0.24□□□□□ -2.37
PEX27YOR193W RPS29AP41057 56 aaKnown RBP0.23□□□□□ -2.37
PEX27YOR193W YGL258W-AQ3E740 77 aa0.23□□□□□ -2.37
PEX27YOR193W UTP20P35194 2493 aaKnown RBP0.22□□□□□ -2.37
PEX27YOR193W YOR072W-BQ3E832 53 aa0.21□□□□□ -2.38
PEX27YOR193W TOR1P35169 2470 aa0.2□□□□□ -2.38
PEX27YOR193W YDR524C-BQ3E6R4 66 aa0.2□□□□□ -2.38
PEX27YOR193W COA2Q3E823 68 aa0.2□□□□□ -2.38
PEX27YOR193W CHC1P22137 1653 aaKnown RBP0.18□□□□□ -2.38
PEX27YOR193W MLP2P40457 1679 aa0.18□□□□□ -2.38
PEX27YOR193W FLO1P32768 1537 aa0.14□□□□□ -2.39
PEX27YOR193W YJL133C-AQ3E7A3 74 aa0.13□□□□□ -2.39
PEX27YOR193W YOR316C-AQ3E806 69 aa0.12□□□□□ -2.39
PEX27YOR193W YLR342W-AQ3E810 57 aa0.11□□□□□ -2.39
PEX27YOR193W YHR050W-AQ05451 56 aa0.1□□□□□ -2.39
PEX27YOR193W TOR2P32600 2474 aaKnown RBP0.09□□□□□ -2.39
PEX27YOR193W YDR034C-AP0C289 58 aa0.09□□□□□ -2.4
PEX27YOR193W DDR2P89113 61 aa0.09□□□□□ -2.4
PEX27YOR193W COX9P07255 59 aa0.06□□□□□ -2.4
PEX27YOR193W DYN1P36022 4092 aa0.06□□□□□ -2.4
PEX27YOR193W FMP27Q06179 2628 aa0.05□□□□□ -2.4
PEX27YOR193W RPL29P05747 59 aaPredicted RBP0.05□□□□□ -2.4
PEX27YOR193W YPR117WQ06116 2489 aa0.05□□□□□ -2.4
PEX27YOR193W MEC1P38111 2368 aa0.02□□□□□ -2.41
PEX27YOR193W SMX2P40204 77 aaKnown RBP0.02□□□□□ -2.41
PEX27YOR193W YJL127C-BQ3E828 52 aa0.02□□□□□ -2.41
PEX27YOR193W YHR073W-AP0C5N7 58 aa-0.01□□□□□ -2.41
PEX27YOR193W Q0017Q9ZZX8 53 aa-0.01□□□□□ -2.41
PEX27YOR193W GCN1P33892 2672 aaKnown RBP-0.03□□□□□ -2.41
PEX27YOR193W YML054C-AQ3E809 52 aa-0.03□□□□□ -2.41
PEX27YOR193W TRA1P38811 3744 aa-0.03□□□□□ -2.41
PEX27YOR193W TOM7P53507 60 aa-0.04□□□□□ -2.42
PEX27YOR193W TEL1P38110 2787 aa-0.05□□□□□ -2.42
PEX27YOR193W CSF1Q12150 2958 aa-0.06□□□□□ -2.42
PEX27YOR193W YBR056W-AI2HB52 66 aa-0.06□□□□□ -2.42
PEX27YOR193W PMP3P87284 55 aa-0.11□□□□□ -2.43
PEX27YOR193W IRA1P18963 3092 aa-0.12□□□□□ -2.43
PEX27YOR193W HOR7Q05827 59 aa-0.17□□□□□ -2.44
PEX27YOR193W MDN1Q12019 4910 aaKnown RBP-0.17□□□□□ -2.44
PEX27YOR193W NUM1Q00402 2748 aa-0.19□□□□□ -2.44
PEX27YOR193W CUP1-1P0CX80 61 aa-0.21□□□□□ -2.44
PEX27YOR193W CUP1-2P0CX81 61 aa-0.21□□□□□ -2.44
PEX27YOR193W IRA2P19158 3079 aa-0.22□□□□□ -2.45
PEX27YOR193W YMR105W-AQ8TGS8 64 aa-0.24□□□□□ -2.45
PEX27YOR193W VPS13Q07878 3144 aa-0.25□□□□□ -2.45
PEX27YOR193W NCE101Q02820 53 aa-0.28□□□□□ -2.45
PEX27YOR193W YLL066W-BQ8TGJ7 56 aa-0.33□□□□□ -2.46
PEX27YOR193W RPL39P04650 51 aa-0.47□□□□□ -2.48
PEX27YOR193W TOM1Q03280 3268 aa-0.56□□□□□ -2.5
PEX27YOR193W YIL046W-AQ3E7Z4 54 aa-0.7□□□□□ -2.52
PEX27YOR193W Q0297Q9ZZV8 51 aa-0.78□□□□□ -2.53
PEX27YOR193W YDR034W-BQ6Q5X2 51 aa-1.35□□□□□ -2.63
Retrieved 63 of 5,963 RNA–protein pairs in 11.9 ms