RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeastyeast

Gene CDA2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA2YLR308W YGR146C-AQ8TGT9 53 aa0.72□□□□□ -2.29
CDA2YLR308W PEP1P32319 1579 aa0.7□□□□□ -2.3
CDA2YLR308W TOR1P35169 2470 aa0.68□□□□□ -2.3
CDA2YLR308W BUD3P25558 1636 aa0.67□□□□□ -2.3
CDA2YLR308W HIR3P47171 1648 aa0.64□□□□□ -2.31
CDA2YLR308W YPR010C-AA5Z2X5 72 aa0.64□□□□□ -2.31
CDA2YLR308W YLL006W-AQ3E814 58 aa0.62□□□□□ -2.31
CDA2YLR308W RKR1Q04781 1562 aa0.61□□□□□ -2.31
CDA2YLR308W RPS29AP41057 56 aaKnown RBP0.59□□□□□ -2.31
CDA2YLR308W GCN2P15442 1659 aa0.59□□□□□ -2.32
CDA2YLR308W STU1P38198 1513 aa0.57□□□□□ -2.32
CDA2YLR308W THO2P53552 1597 aaKnown RBP0.56□□□□□ -2.32
CDA2YLR308W YGL258W-AQ3E740 77 aa0.55□□□□□ -2.32
CDA2YLR308W YDR524C-BQ3E6R4 66 aa0.53□□□□□ -2.32
CDA2YLR308W COA2Q3E823 68 aa0.53□□□□□ -2.32
CDA2YLR308W NUP170P38181 1502 aa0.5□□□□□ -2.33
CDA2YLR308W YOR072W-BQ3E832 53 aa0.5□□□□□ -2.33
CDA2YLR308W FIG2P25653 1609 aa0.48□□□□□ -2.33
CDA2YLR308W ATG2P53855 1592 aa0.45□□□□□ -2.34
CDA2YLR308W YBR056W-AI2HB52 66 aa0.42□□□□□ -2.34
CDA2YLR308W YOR316C-AQ3E806 69 aa0.32□□□□□ -2.36
CDA2YLR308W TOR2P32600 2474 aaKnown RBP0.31□□□□□ -2.36
CDA2YLR308W YJL133C-AQ3E7A3 74 aa0.29□□□□□ -2.36
CDA2YLR308W YLR342W-AQ3E810 57 aa0.28□□□□□ -2.36
CDA2YLR308W FLO1P32768 1537 aa0.28□□□□□ -2.37
CDA2YLR308W YPR117WQ06116 2489 aa0.27□□□□□ -2.37
CDA2YLR308W FMP27Q06179 2628 aa0.27□□□□□ -2.37
CDA2YLR308W YHR050W-AQ05451 56 aa0.26□□□□□ -2.37
CDA2YLR308W MEC1P38111 2368 aa0.25□□□□□ -2.37
CDA2YLR308W MLP2P40457 1679 aa0.24□□□□□ -2.37
CDA2YLR308W DDR2P89113 61 aa0.23□□□□□ -2.37
CDA2YLR308W COX9P07255 59 aa0.22□□□□□ -2.37
CDA2YLR308W YDR034C-AP0C289 58 aa0.21□□□□□ -2.38
CDA2YLR308W CHC1P22137 1653 aaKnown RBP0.21□□□□□ -2.38
CDA2YLR308W RPL29P05747 59 aaPredicted RBP0.12□□□□□ -2.39
CDA2YLR308W DYN1P36022 4092 aa0.07□□□□□ -2.4
CDA2YLR308W NUM1Q00402 2748 aa0.07□□□□□ -2.4
CDA2YLR308W SMX2P40204 77 aaKnown RBP0.06□□□□□ -2.4
CDA2YLR308W MDN1Q12019 4910 aaKnown RBP0.04□□□□□ -2.4
CDA2YLR308W TEL1P38110 2787 aa0.03□□□□□ -2.4
CDA2YLR308W YJL127C-BQ3E828 52 aa0.03□□□□□ -2.4
CDA2YLR308W Q0017Q9ZZX8 53 aa0.02□□□□□ -2.41
CDA2YLR308W YHR073W-AP0C5N7 58 aa0.01□□□□□ -2.41
CDA2YLR308W GCN1P33892 2672 aaKnown RBP0.01□□□□□ -2.41
CDA2YLR308W CSF1Q12150 2958 aa-0.02□□□□□ -2.41
CDA2YLR308W YML054C-AQ3E809 52 aa-0.03□□□□□ -2.41
CDA2YLR308W TOM7P53507 60 aa-0.11□□□□□ -2.43
CDA2YLR308W TRA1P38811 3744 aa-0.15□□□□□ -2.43
CDA2YLR308W IRA1P18963 3092 aa-0.19□□□□□ -2.44
CDA2YLR308W PMP3P87284 55 aa-0.25□□□□□ -2.45
CDA2YLR308W CUP1-1P0CX80 61 aa-0.29□□□□□ -2.46
CDA2YLR308W CUP1-2P0CX81 61 aa-0.29□□□□□ -2.46
CDA2YLR308W IRA2P19158 3079 aa-0.29□□□□□ -2.46
CDA2YLR308W HOR7Q05827 59 aa-0.31□□□□□ -2.46
CDA2YLR308W VPS13Q07878 3144 aa-0.31□□□□□ -2.46
CDA2YLR308W YLL066W-BQ8TGJ7 56 aa-0.38□□□□□ -2.47
CDA2YLR308W NCE101Q02820 53 aa-0.39□□□□□ -2.47
CDA2YLR308W YMR105W-AQ8TGS8 64 aa-0.41□□□□□ -2.48
CDA2YLR308W TOM1Q03280 3268 aa-0.43□□□□□ -2.48
CDA2YLR308W RPL39P04650 51 aa-0.48□□□□□ -2.49
CDA2YLR308W YIL046W-AQ3E7Z4 54 aa-0.61□□□□□ -2.51
CDA2YLR308W Q0297Q9ZZV8 51 aa-0.73□□□□□ -2.53
CDA2YLR308W YDR034W-BQ6Q5X2 51 aa-1.1□□□□□ -2.59
Retrieved 63 of 5,963 RNA–protein pairs in 90.6 ms