RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ASNSD1Q9NWL6 643 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 RRN3Q9NYV6 651 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 GMIPQ9P107 970 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 PAXBP1Q9Y5B6 917 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 MYO1FO00160 1098 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 DAB1O75553 588 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 GRAP2O75791 330 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 LCA5LO95447 670 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 VNN2O95498 520 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 NCAM1P13591 858 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 POU3F3P20264 500 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 DDX6P26196 483 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 MTHFRP42898 656 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 DAOAP59103 153 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 YWHAZP63104 245 aaKnown RBP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 C2CD6Q53TS8 623 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 C10orf120Q5SQS8 335 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 HECTD3Q5T447 861 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 GPRIN1Q7Z2K8 1008 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 SCML4Q8N228 414 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 RFFLQ8WZ73 363 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 PABPC5Q96DU9 382 aaKnown RBP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 TMEM51Q9NW97 253 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 ANAPC7Q9UJX3 599 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 FAM50BQ9Y247 325 aa13.57□□□□□ -0.24
PHGDH-220ENST00000641570 MRPS23Q9Y3D9 190 aaKnown RBP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-220ENST00000641570 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 HHLA1C9JL84 531 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 TNFRSF10BO14763 440 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 PAPSS1O43252 624 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-220ENST00000641570 RNF8O76064 485 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 RHOP08100 348 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 RARGP13631 454 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 GPD1P21695 349 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 PSMA2P25787 234 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
PHGDH-220ENST00000641570 AVPR1AP37288 418 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 SULT1E1P49888 294 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 GSCP56915 257 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-220ENST00000641570 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 ZFYVE27Q5T4F4 411 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 OLFML1Q6UWY5 402 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 TMEM184AQ6ZMB5 413 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 SLC26A9Q7LBE3 791 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-220ENST00000641570 C12orf76Q8N812 135 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-220ENST00000641570 TTC16Q8NEE8 873 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 FEZF2Q8TBJ5 459 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 NCAPGQ9BPX3 1015 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 TTLL2Q9BWV7 592 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 LZTFL1Q9NQ48 299 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-220ENST00000641570 IP6K2Q9UHH9 426 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 CD207Q9UJ71 328 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 RASAL2Q9UJF2 1139 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 USP3Q9Y6I4 520 aa13.56□□□□□ -0.24
PHGDH-220ENST00000641570 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 A0A1W2PRU2 124 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 MACROD2A1Z1Q3 448 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 SIGLEC16A6NMB1 481 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 DPYSL4O14531 572 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 LINC01565O15544 149 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 KIF5CO60282 957 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 CYP1A2P05177 515 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 CKMP06732 381 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 FSHRP23945 695 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-220ENST00000641570 USP46P62068 366 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 ADAM15Q13444 863 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 PM20D1Q6GTS8 502 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 GET4Q7L5D6 327 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-220ENST00000641570 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 VN1R2Q8NFZ6 395 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 CLEC4CQ8WTT0 213 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 EDEM1Q92611 657 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 MCRS1Q96EZ8 462 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 SERPINB11Q96P15 392 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 PACSIN1Q9BY11 444 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 TMEM30AQ9NV96 361 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms