RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 Q6ZNB5 142 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 BBS12Q6ZW61 710 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ACOT1Q86TX2 421 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 NUP93Q8N1F7 819 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SLC35F6Q8N357 371 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ZSCAN18Q8TBC5 510 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 FAM84AQ96KN4 292 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 KLHL5Q96PQ7 755 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 OSBPL9Q96SU4 736 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 NUP85Q9BW27 656 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 KLC2Q9H0B6 622 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SLITRK6Q9H5Y7 841 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 AMACRQ9UHK6 382 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DOCK8Q8NF50 2099 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 TBKBP1A7MCY6 615 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 NCK2O43639 380 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 BEST1O76090 585 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 TRUB2O95900 331 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 HDAC4P56524 1084 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DUSP6Q16828 381 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DSTYKQ6XUX3 929 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 CPXM2Q8N436 756 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ZNF830Q96NB3 372 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DZANK1Q9NVP4 752 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 TLR6Q9Y2C9 796 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 PCDHB12Q9Y5F1 795 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SLC4A7Q9Y6M7 1214 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 CTAGE9A4FU28 777 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 EFCAB8A8MWE9 144 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SMAPO00193 183 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ATF6P18850 670 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 L1CAMP32004 1257 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 CDKN2BP42772 138 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 YWHAZP63104 245 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DPYSQ14117 519 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 FRG1Q14331 258 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SMC1AQ14683 1233 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SLC35B2Q8TB61 432 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 IPO4Q8TEX9 1081 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 PPP1R13LQ8WUF5 828 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ZFRQ96KR1 1074 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DESI2Q9BSY9 194 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ACP6Q9NPH0 428 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 UXTQ9UBK9 157 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 NXF1Q9UBU9 619 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 E5RJQ4 531 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 FGF18O76093 207 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ZBED1O96006 694 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 CSH1P0DML2 217 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 CSH2P0DML3 217 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 HARSP12081 509 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 GPD1P21695 349 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 RFC1P35251 1148 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ALDH7A1P49419 539 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 PTPN21Q16825 1174 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 TDRD12Q587J7 1177 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 C12orf29Q8N999 325 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 MYRIPQ8NFW9 859 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 RBM41Q96IZ5 413 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 TSGA13Q96PP4 275 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 NAP1L3Q99457 506 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 OSGEPQ9NPF4 335 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 PRDM5Q9NQX1 630 aaPredicted RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 DNMT3BQ9UBC3 853 aaKnown RBP6.49□□□□□ -1.37
RGPD1-206ENST00000641458 FZD10Q9ULW2 581 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 SAR1BQ9Y6B6 198 aa6.49□□□□□ -1.37
RGPD1-206ENST00000641458 CASTOR2A6NHX0 329 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 IRAK2O43187 625 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 TADA2AO75478 443 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 PALMO75781 387 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 PTMAP06454 111 aaKnown RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 KRT3P12035 628 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 OASLQ15646 514 aaKnown RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 PSMD5Q16401 504 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 ARHGAP29Q52LW3 1261 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 CCDC117Q8IWD4 279 aaPredicted RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 CEP112Q8N8E3 955 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 ALG3Q92685 438 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 ZNF653Q96CK0 615 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 LMLNQ96KR4 655 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 TGS1Q96RS0 853 aaKnown RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 PPP1R16BQ96T49 567 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 DEF6Q9H4E7 631 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 ATP2A2P16615 1042 aaKnown RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 NR2C2P49116 596 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 CKAP4Q07065 602 aaKnown RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 PLPP4Q5VZY2 271 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 TAS1R1Q7RTX1 841 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 HEXIM2Q96MH2 286 aaKnown RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 CRISPLD1Q9H336 500 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 AMFRQ9UKV5 643 aa6.48□□□□□ -1.37
RGPD1-206ENST00000641458 ZFP37Q9Y6Q3 630 aaPredicted RBP6.48□□□□□ -1.37
RGPD1-206ENST00000641458 KRT19P08727 400 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms