RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 CCSER2Q9H7U1 834 aa15.54■□□□□ 0.08
TARDBP-231ENST00000639599 FAM49BQ9NUQ9 324 aa15.54■□□□□ 0.08
TARDBP-231ENST00000639599 KIF26AQ9ULI4 1882 aaPredicted RBP15.54■□□□□ 0.08
TARDBP-231ENST00000639599 PDXKO00764 312 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 TLR5O60602 858 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 C4BPAP04003 597 aaKnown RBP15.53■□□□□ 0.08
TARDBP-231ENST00000639599 NDST1P52848 882 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 ATXN3P54252 364 aaPredicted RBP15.53■□□□□ 0.08
TARDBP-231ENST00000639599 LMAN2Q12907 356 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 STK4Q13043 487 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 ORC1Q13415 861 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 UAP1L1Q3KQV9 507 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 GRAMD4Q6IC98 578 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 ARMCX6Q7L4S7 300 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 UNC93AQ86WB7 457 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 C12orf40Q86WS4 652 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 SLC9A9Q8IVB4 645 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 IL17RCQ8NAC3 791 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 TMC2Q8TDI7 906 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 RLN3Q8WXF3 142 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■■■□ 22.4
TARDBP-231ENST00000639599 SPHK2Q9NRA0 654 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 TMEM30AQ9NV96 361 aa15.53■□□□□ 0.08
TARDBP-231ENST00000639599 DNAJC17Q9NVM6 304 aaKnown RBP15.53■□□□□ 0.08
TARDBP-231ENST00000639599 LNP1A1A4G5 178 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 SGK1O00141 431 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 HOXC11O43248 304 aaPredicted RBP15.52■□□□□ 0.08
TARDBP-231ENST00000639599 HOXB2P14652 356 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 PFKFB1P16118 471 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 BCKDHBP21953 392 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.08
TARDBP-231ENST00000639599 ATP5C1P36542 298 aaKnown RBP15.52■□□□□ 0.08
TARDBP-231ENST00000639599 VAMP7P51809 220 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 KRT85P78386 507 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 GAB4Q2WGN9 574 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 ZACNQ401N2 412 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 LYSMD4Q5XG99 296 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 TMEM92Q6UXU6 159 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 BBS7Q8IWZ6 715 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 FUKQ8N0W3 1084 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 KIAA0895Q8NCT3 520 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 PLEKHO2Q8TD55 490 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 KCNV2Q8TDN2 545 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 ELMO3Q96BJ8 720 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 SPATA32Q96LK8 384 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 MMRN2Q9H8L6 949 aa15.52■□□□□ 0.08
TARDBP-231ENST00000639599 ZNF638Q14966 1978 aaKnown RBP15.51■□□□□ 0.07
TARDBP-231ENST00000639599 A0A1B0GVL5 298 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 NEDD8-MDP1E9PL57 170 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 IKBKBO14920 756 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 AP5Z1O43299 807 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 ACTN4O43707 911 aaKnown RBP15.51■□□□□ 0.07
TARDBP-231ENST00000639599 TULP3O75386 442 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 VNN1O95497 513 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 HLA-DRAP01903 254 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 NR2F2P24468 414 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 SYKP43405 635 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 DLG4P78352 724 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 CLDN10P78369 228 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 TRIM61Q5EBN2 209 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 SLC36A4Q6YBV0 504 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 INTS8Q75QN2 995 aaKnown RBP15.51■□□□□ 0.07
TARDBP-231ENST00000639599 SV2AQ7L0J3 742 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 CHPFQ8IZ52 775 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 TERB1Q8NA31 727 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 BBS2Q9BXC9 721 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 NT5C1AQ9BXI3 368 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
TARDBP-231ENST00000639599 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 ZDHHC4Q9NPG8 344 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 WDR35Q9P2L0 1181 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 PCDHA5Q9Y5H7 936 aa15.51■□□□□ 0.07
TARDBP-231ENST00000639599 DMXL1Q9Y485 3027 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 NCOR2Q9Y618 2525 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 KLRC4O43908 158 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 CFIP05156 583 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 RALAP11233 206 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 CD58P19256 250 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 ACO1P21399 889 aaKnown RBP15.5■□□□□ 0.07
TARDBP-231ENST00000639599 PMLP29590 882 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 P2RY2P41231 377 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 KIR2DL1P43626 348 aaPredicted RBP15.5■□□□□ 0.07
TARDBP-231ENST00000639599 SLC8A3P57103 927 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 RPL6Q02878 288 aaKnown RBP15.5■□□□□ 0.07
TARDBP-231ENST00000639599 ZNF252P-AS1Q0IIN9 211 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 C10orf120Q5SQS8 335 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 SH3PXD2AQ5TCZ1 1133 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 SPOPLQ6IQ16 392 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 TPGS1Q6ZTW0 290 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 PAQR9Q6ZVX9 377 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 SYT12Q8IV01 421 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 TMEFF1Q8IYR6 380 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 CRYBG2Q8N1P7 616 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 CDK5RAP1Q96SZ6 601 aaKnown RBP15.5■□□□□ 0.07
TARDBP-231ENST00000639599 SMOQ99835 787 aa15.5■□□□□ 0.07
TARDBP-231ENST00000639599 SLC32A1Q9H598 525 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms