RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 RGS9BPQ6ZS82 235 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 C7orf31Q8N865 590 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 GPRC5AQ8NFJ5 357 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 PCDH19Q8TAB3 1148 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 CLEC4CQ8WTT0 213 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 CYTH2Q99418 400 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 EIF2AQ9BY44 585 aaKnown RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 PHACTR1Q9C0D0 580 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 DPEP3Q9H4B8 488 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 USP29Q9HBJ7 922 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 PCDH18Q9HCL0 1135 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 SETD4Q9NVD3 440 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 USH1CQ9Y6N9 552 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 SCN1AP35498 2009 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 CITO14578 2027 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 TRIP11Q15643 1979 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 APOL1O14791 398 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 PAPSS1O43252 624 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 SNAI1O95863 264 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 MT-ND3P03897 115 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 SDC4P31431 198 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 GRM5P41594 1212 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 SLC6A3Q01959 620 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 FAAP100Q0VG06 881 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 OVGP1Q12889 678 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 PTK7Q13308 1070 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 KYAT1Q16773 422 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 ASRGL1Q7L266 308 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 PRPF39Q86UA1 669 aaKnown RBP11.04□□□□□ -0.64
NECAP1-216ENST00000639167 VSIG1Q86XK7 387 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 MAP7D3Q8IWC1 876 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 OR6B3Q8NGW1 331 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.643e-8■■■■□ 26.1
NECAP1-216ENST00000639167 SERAC1Q96JX3 654 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 CDHR5Q9HBB8 845 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 ETNK1Q9HBU6 452 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 VTA1Q9NP79 307 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 NPHS2Q9NP85 383 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 ARHGEF3Q9NR81 526 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 FETUBQ9UGM5 382 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 TEX264Q9Y6I9 313 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 ZSWIM8A7E2V4 1837 aa11.04□□□□□ -0.64
NECAP1-216ENST00000639167 COL1A2P08123 1366 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SMAPO00193 183 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 FAM155BO75949 473 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 ZWINTO95229 277 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 STAU1O95793 577 aaKnown RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 ZBED1O96006 694 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SMPD1P17405 629 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 TARSP26639 723 aaKnown RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 ADORA2BP29275 332 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SETDB1Q15047 1291 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 PKDCCQ504Y2 493 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 CCDC110Q8TBZ0 833 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 C10orf82Q8WW14 230 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 TMEM237Q96Q45 408 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 KATNBL1Q9H079 304 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 HESX1Q9UBX0 185 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 KIAA1257Q9ULG3 409 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 L3MBTL1Q9Y468 752 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 IKBKGQ9Y6K9 419 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 A8MXQ7 604 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 DPYSL4O14531 572 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 CHADO15335 359 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 LPXNO60711 386 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 UNC5CO95185 931 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 INHBAP08476 426 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 PDGFRBP09619 1106 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 CCDC130P13994 396 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 HOXA11P31270 313 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 HDAC4P56524 1084 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 YWHAZP63104 245 aaKnown RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 ZNF200P98182 395 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 CCDC15Q0P6D6 951 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 PDK2Q15119 407 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 BOLA3Q53S33 107 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 ZNF449Q6P9G9 518 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 CATSPER4Q7RTX7 472 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 CTAGE3PQ8IX95 158 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SLC35F5Q8WV83 523 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 PTPRN2Q92932 1015 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 LRRC37BQ96QE4 947 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 ZNF408Q9H9D4 720 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 SSU72Q9NP77 194 aaKnown RBP11.03□□□□□ -0.64
NECAP1-216ENST00000639167 PAK5Q9P286 719 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 HAO1Q9UJM8 370 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 DCTN4Q9UJW0 460 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 GJD2Q9UKL4 321 aa11.03□□□□□ -0.64
NECAP1-216ENST00000639167 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-216ENST00000639167 RBM47A0AV96 593 aaKnown RBP11.02□□□□□ -0.65
NECAP1-216ENST00000639167 F5H423 210 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms