RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 GABBR1Q9UBS5 961 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 LPAR3Q9UBY5 353 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 CCP110O43303 1012 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 SMAD6O43541 496 aaKnown RBP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 NCLP19338 710 aaKnown RBP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 HTR6P50406 440 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 TIAL1Q01085 375 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 KCNB1Q14721 858 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 PTPROQ16827 1216 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 SLC9C1Q4G0N8 1177 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 C16orf71Q8IYS4 520 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 ACRBPQ8NEB7 543 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 DNAJB14Q8TBM8 379 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 GPATCH3Q96I76 525 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 PPP1R9BQ96SB3 815 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 BRINP2Q9C0B6 783 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 A1CFQ9NQ94 594 aaKnown RBP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 IP6K2Q9UHH9 426 aa4.29□□□□□ -1.72
CCDC7-211ENST00000638889 PNMA8BQ9ULN7 279 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-211ENST00000638889 B4DGG1 531 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 CD3EAPO15446 510 aaKnown RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 PHGDHO43175 533 aaKnown RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 UBXN7O94888 489 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 CYP19A1P11511 503 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 EN2P19622 333 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 ZNF267Q14586 743 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 DCAF12L1Q5VU92 463 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 COLCA1Q6ZS62 124 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 C12orf76Q8N812 135 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 SUCLG2Q96I99 432 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 HIC2Q96JB3 615 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 AIFM3Q96NN9 605 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 HIPK2Q9H2X6 1198 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 AASDHPPTQ9NRN7 309 aa4.28□□□□□ -1.72
CCDC7-211ENST00000638889 DNMT3BQ9UBC3 853 aaKnown RBP4.28□□□□□ -1.72
CCDC7-211ENST00000638889 LOC102723971A0A1B0GUV8 181 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 AP1G1O43747 822 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 MARCH6O60337 910 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 SRGAP2O75044 1071 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 CT47B1P0C2W7 299 aaPredicted RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 CD19P15391 556 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 HSPA6P17066 643 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 TACR3P29371 465 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 AGFG1P52594 562 aaKnown RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 ZNF750Q32MQ0 723 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 DAB2IPQ5VWQ8 1189 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 DLK2Q6UY11 383 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 CHPFQ8IZ52 775 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 MMP21Q8N119 569 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 SPSB4Q96A44 273 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 THOC3Q96J01 351 aaKnown RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 ZMAT3Q9HA38 289 aaKnown RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 NKX1-2Q9UD57 310 aaPredicted RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 ZNF112Q9UJU3 913 aa4.27□□□□□ -1.73
CCDC7-211ENST00000638889 NOP58Q9Y2X3 529 aaKnown RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.27□□□□□ -1.73
CCDC7-211ENST00000638889 ANKRD62A6NC57 917 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 MBD3L4A6NDZ8 208 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 MBD3L3A6NE82 208 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 A8MVJ9 347 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 TMEM233B4DJY2 109 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 CLIC1O00299 241 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 RGS10O43665 173 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 RASAL1O95294 804 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 KITP10721 976 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 IBSPP21815 317 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 MTX1Q13505 466 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 STIM1Q13586 685 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 MFSD13AQ14CX5 517 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 FAM110CQ1W6H9 321 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 ANO6Q4KMQ2 910 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 CC2D1BQ5T0F9 858 aaKnown RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 CACHD1Q5VU97 1274 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 B3GNT9Q6UX72 402 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 ZDHHC24Q6UX98 284 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 PNPLA1Q8N8W4 532 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 IGFBPL1Q8WX77 278 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 HOOK2Q96ED9 719 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 EDC3Q96F86 508 aaKnown RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 WDYHV1Q96HA8 205 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 KAZALD1Q96I82 304 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 DHX36Q9H2U1 1008 aaKnown RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 SEMA4BQ9NPR2 832 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 RGS17Q9UGC6 210 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-211ENST00000638889 NOTCH4Q99466 2003 aa4.26□□□□□ -1.73
CCDC7-211ENST00000638889 EME2A4GXA9 379 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-211ENST00000638889 EXOC5O00471 708 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 CD63P08962 238 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 T-ENOLP0DO92 83 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 GATMP50440 423 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 B4GALNT1Q00973 533 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 SLC14A1Q13336 389 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 ST3GAL2Q16842 350 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 PFKFB3Q16875 520 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-211ENST00000638889 UBAP2Q5T6F2 1119 aaKnown RBP4.25□□□□□ -1.73
CCDC7-211ENST00000638889 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms