RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PTGISQ16647 500 aa13.52□□□□□ -0.25
UBE3A-228ENST00000638155 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
UBE3A-228ENST00000638155 OR7A2PQ8NGA2 310 aa13.52□□□□□ -0.25
UBE3A-228ENST00000638155 SLC35G2Q8TBE7 412 aa13.52□□□□□ -0.25
UBE3A-228ENST00000638155 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.25
UBE3A-228ENST00000638155 CHMP1AQ9HD42 196 aaPredicted RBP13.52□□□□□ -0.25
UBE3A-228ENST00000638155 SNX12Q9UMY4 172 aa13.52□□□□□ -0.25
UBE3A-228ENST00000638155 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 NPR2P20594 1047 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 MAGEA4P43358 317 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 B3GNT6Q6ZMB0 384 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 TFB1MQ8WVM0 346 aaKnown RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 TRAPPC8Q9Y2L5 1435 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 MDM4O15151 490 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 CPSF4O95639 269 aaKnown RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 RB1P06400 928 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 PRCPP42785 496 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 CLVS1Q8IUQ0 354 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 PHACTR4Q8IZ21 702 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 GDPD5Q8WTR4 605 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 EMSYQ7Z589 1322 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 NUDT14O95848 222 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 SFNP31947 248 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 VBP1P61758 197 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 NEK5Q6P3R8 708 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 BARGINQ6ZT62 677 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 POU5F1Q01860 360 aaKnown RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 EFHC1Q5JVL4 640 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 SMYD1Q8NB12 490 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 WDR41Q9HAD4 459 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 ELL3Q9HB65 397 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 PNPLA8Q9NP80 782 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 WDR35Q9P2L0 1181 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 ZBTB22O15209 634 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 DAW1Q8N136 415 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 AGPAT1Q99943 283 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 XPR1Q9UBH6 696 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 MAFFQ9ULX9 164 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 FAM50BQ9Y247 325 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 TMEM114B3SHH9 223 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 HAT1O14929 419 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 HOXC9P31274 260 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 GNA13Q14344 377 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 TDRD5Q8NAT2 981 aaKnown RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 PIF1Q9H611 641 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 STARD13Q9Y3M8 1113 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 ADCY6O43306 1168 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 ALDH3A2P51648 485 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 CASP5P51878 434 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 Q4G0T1 1027 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 NAPEPLDQ6IQ20 393 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 HAUS6Q7Z4H7 955 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 AKAP7Q9P0M2 348 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 VTI1BQ9UEU0 232 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 CHORDC1Q9UHD1 332 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 RBM7Q9Y580 266 aaKnown RBP13.51□□□□□ -0.25
UBE3A-228ENST00000638155 PLB1Q6P1J6 1458 aa13.51□□□□□ -0.25
UBE3A-228ENST00000638155 KMOO15229 486 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 ZNF432O94892 652 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 OR6A2O95222 327 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 IP6K1Q92551 441 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FAM120BQ96EK7 910 aaKnown RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 COX4I2Q96KJ9 171 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FRMD8Q9BZ67 464 aaPredicted RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 KCTD10Q9H3F6 313 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 LRCH1Q9Y2L9 728 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 PTGES3LE9PB15 166 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 UMPSP11172 480 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 ATF4P18848 351 aaPredicted RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FNIP1Q8TF40 1166 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 S100ZQ8WXG8 99 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 HEY2Q9UBP5 337 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 LNPEPQ9UIQ6 1025 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 ATP5F1P24539 256 aaPredicted RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 CHRNDQ07001 517 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FGD3Q5JSP0 725 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 USP17L2Q6R6M4 530 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 RAB11FIP2Q7L804 512 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FRMD5Q7Z6J6 570 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 DCAF4Q8WV16 495 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 TBC1D22BQ9NU19 505 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 OR7A10O76100 309 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 HPCAL1P37235 193 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 KYQ8NBH2 561 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 RMDN3Q96TC7 470 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 NLNQ9BYT8 704 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 HIST1H2ABP04908 130 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 PTGS2P35354 604 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 HARS2P49590 506 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms