RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 FMO5P49326 533 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 CUL2Q13617 745 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 BBS7Q8IWZ6 715 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 KIAA2013Q8IYS2 634 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 ADGRG2Q8IZP9 1017 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 RPLP0P6Q8NHW5 317 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 KAT5Q92993 513 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 TMEM176AQ96HP8 235 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 SCML2Q9UQR0 700 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 EML5Q05BV3 1969 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 HRO43593 1189 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 PAPSS2O95340 614 aaPredicted RBP18.7■□□□□ 0.58
PNKP-230ENST00000638016 CALCAP01258 141 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 TUBP50607 506 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 KIF11P52732 1056 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 SEC13P55735 322 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 RHBDF2Q6PJF5 856 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 SCD5Q86SK9 330 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 TTC30AQ86WT1 665 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 SYNPOQ8N3V7 929 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 UBR7Q8N806 425 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 CEP63Q96MT8 703 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 DUSP16Q9BY84 665 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 FAM126AQ9BYI3 521 aaPredicted RBP18.7■□□□□ 0.58
PNKP-230ENST00000638016 FBXO44Q9H4M3 255 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 TLR8Q9NR97 1041 aaKnown RBP18.7■□□□□ 0.58
PNKP-230ENST00000638016 COMMD8Q9NX08 183 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 CHMP5Q9NZZ3 219 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 CEP250Q9BV73 2442 aa18.7■□□□□ 0.58
PNKP-230ENST00000638016 DRD1P21728 446 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 PPP2R5DQ14738 602 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 GOLGA7BQ2TAP0 167 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 LY6G5CQ5SRR4 150 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 NDRG1Q92597 394 aaKnown RBP18.69■□□□□ 0.58
PNKP-230ENST00000638016 RUBCNQ92622 972 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 HHIPQ96QV1 700 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 NACA2Q9H009 215 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 ZDHHC4Q9NPG8 344 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 SH3BP1Q9Y3L3 701 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 DMXL1Q9Y485 3027 aa18.69■□□□□ 0.58
PNKP-230ENST00000638016 GREM1O60565 184 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 TRIM21P19474 475 aaKnown RBP18.68■□□□□ 0.58
PNKP-230ENST00000638016 UBE2HP62256 183 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 AMPD2Q01433 879 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 KDSRQ06136 332 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 NR1H3Q13133 447 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 PAK1Q13153 545 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 ARHGAP17Q68EM7 881 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 PRR23BQ6ZRT6 265 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 PIGZQ86VD9 579 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 MED15Q96RN5 788 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 KLF16Q9BXK1 252 aaPredicted RBP18.68■□□□□ 0.58
PNKP-230ENST00000638016 GTPBP4Q9BZE4 634 aaKnown RBP18.68■□□□□ 0.58
PNKP-230ENST00000638016 METTL14Q9HCE5 456 aaKnown RBP18.68■□□□□ 0.58
PNKP-230ENST00000638016 PNPLA8Q9NP80 782 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 CYLDQ9NQC7 956 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 NCDNQ9UBB6 729 aa18.68■□□□□ 0.58
PNKP-230ENST00000638016 MYO18AQ92614 2054 aaKnown RBP18.68■□□□□ 0.58
PNKP-230ENST00000638016 E2F8A0AVK6 867 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 K7EQS6 105 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 ADH5P11766 374 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 RARGP13631 454 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 NRLP54845 237 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 LONP2Q86WA8 852 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 DDX42Q86XP3 938 aaKnown RBP eCLIP18.67■□□□□ 0.58
PNKP-230ENST00000638016 ARHGEF19Q8IW93 802 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 TRIM59Q8IWR1 403 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 NAT16Q8N8M0 369 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 LMO3Q8TAP4 145 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 FAXDC2Q96IV6 333 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 SRRTQ9BXP5 876 aaKnown RBP18.67■□□□□ 0.58
PNKP-230ENST00000638016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.67■□□□□ 0.58
PNKP-230ENST00000638016 NAGPAQ9UK23 515 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 TSPAN16Q9UKR8 245 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 USP3Q9Y6I4 520 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 SPAG17Q6Q759 2223 aa18.67■□□□□ 0.58
PNKP-230ENST00000638016 RNF225M0QZC1 329 aaPredicted RBP18.66■□□□□ 0.58
PNKP-230ENST00000638016 SLC9A3R1O14745 358 aaPredicted RBP18.66■□□□□ 0.58
PNKP-230ENST00000638016 TRIM24O15164 1050 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 CHRM1P11229 460 aaPredicted RBP18.66■□□□□ 0.58
PNKP-230ENST00000638016 CD19P15391 556 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 PPP1R2P41236 205 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 PDE4CQ08493 712 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 C2orf27AQ580R0 203 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 TMEM25Q86YD3 366 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 UBA3Q8TBC4 463 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 TFAP2BQ92481 460 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 P2RY11Q96G91 374 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 ZSWIM1Q9BR11 485 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 KIAA1468Q9P260 1216 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 SLC8A2Q9UPR5 921 aa18.66■□□□□ 0.58
PNKP-230ENST00000638016 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 ATP5C1P36542 298 aaKnown RBP18.65■□□□□ 0.58
PNKP-230ENST00000638016 SIM2Q14190 667 aaPredicted RBP18.65■□□□□ 0.58
PNKP-230ENST00000638016 FBXO43Q4G163 708 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 C10orf120Q5SQS8 335 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 EMC10Q5UCC4 262 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 TMEM270Q6UE05 265 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms