RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 KRT39Q6A163 491 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 ZMIZ2Q8NF64 920 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 TSTD1Q8NFU3 115 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 HHIPQ96QV1 700 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 SMOQ99835 787 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 NACA2Q9H009 215 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 SMPD4Q9NXE4 827 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 MMP17Q9ULZ9 603 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 PCDHA5Q9Y5H7 936 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 MYOFQ9NZM1 2061 aa13.9□□□□□ -0.18
SYNGAP1-224ENST00000637721 CETN3O15182 167 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 TLR5O60602 858 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZNF806P0C7X5 589 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ADH5P11766 374 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 CCDC130P13994 396 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 GRIA2P42262 883 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 TNFRSF4P43489 277 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 GCLMP48507 274 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 PXNP49023 591 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 DGKEP52429 567 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 MAP3K7CLP57077 242 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ELF2Q15723 593 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 GAB4Q2WGN9 574 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZCWPW2Q504Y3 356 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 NAIF1Q69YI7 327 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 SPOPLQ6IQ16 392 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 RHBDF2Q6PJF5 856 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 TADA2BQ86TJ2 420 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 FMR1NBQ8N0W7 255 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ENGASEQ8NFI3 743 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 CNOT6LQ96LI5 555 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 GMIPQ9P107 970 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 SCML2Q9UQR0 700 aa13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-224ENST00000637721 MYO18AQ92614 2054 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 MED19A0JLT2 244 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 HOXC11O43248 304 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 GADD45BO75293 160 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 CILPO75339 1184 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 KAT7O95251 611 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 ATP5C1P36542 298 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 PPP3CAQ08209 521 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 CRY1Q16526 586 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 PLK5Q496M5 336 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 USP39Q53GS9 565 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 EOGTQ5NDL2 527 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 TRMT11Q7Z4G4 463 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 KBTBD6Q86V97 674 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 RASSF3Q86WH2 238 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZNF276Q8N554 614 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 C12orf29Q8N999 325 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 C12orf50Q8NA57 414 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 TAS1R2Q8TE23 839 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 CDK5RAP1Q96SZ6 601 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 ARRDC1-AS1Q9H2J1 176 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 CYLDQ9NQC7 956 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 ARHGEF4Q9NR80 690 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 FAM49BQ9NUQ9 324 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 HMGXB4Q9UGU5 601 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 HOOK1Q9UJC3 728 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 LSM7Q9UK45 103 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 MAPK8IP1Q9UQF2 711 aa13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-224ENST00000637721 SLC16A3O15427 465 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 BEST1O76090 585 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 ADORA2BP29275 332 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 MXI1P50539 228 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 C2orf27AQ580R0 203 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 PLA2G2CQ5R387 149 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 LY6G5CQ5SRR4 150 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 HTR3DQ70Z44 454 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 FBXL13Q8NEE6 735 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 TSG101Q99816 390 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 DUSP16Q9BY84 665 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 DUSP15Q9H1R2 295 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 APOBEC3GQ9HC16 384 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 POLMQ9NP87 494 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 SPHK2Q9NRA0 654 aa13.87□□□□□ -0.19
SYNGAP1-224ENST00000637721 DEC1Q9P2X7 70 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms