RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.23■□□□□ 0.99
CLN6-222ENST00000637667 TLR5O60602 858 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 EPN2O95208 641 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 GTF2H1P32780 548 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 EIF2DP41214 584 aaKnown RBP21.23■□□□□ 0.99
CLN6-222ENST00000637667 PGFP49763 221 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 MESP2Q0VG99 397 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 LY6G5CQ5SRR4 150 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 C12orf40Q86WS4 652 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 SMYD4Q8IYR2 804 aaPredicted RBP21.23■□□□□ 0.99
CLN6-222ENST00000637667 CCDC150Q8NCX0 1101 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 TSTD1Q8NFU3 115 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 ZC3H10Q96K80 434 aaKnown RBP21.23■□□□□ 0.99
CLN6-222ENST00000637667 ARRDC1-AS1Q9H2J1 176 aa21.23■□□□□ 0.99
CLN6-222ENST00000637667 TLR8Q9NR97 1041 aaKnown RBP21.23■□□□□ 0.99
CLN6-222ENST00000637667 DCDC2BA2VCK2 349 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 ANTXRLA6NF34 631 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 SLC30A4O14863 429 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 CILPO75339 1184 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 KAT7O95251 611 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 APODP05090 189 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 CD58P19256 250 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 MCCD1P59942 119 aaPredicted RBP21.22■□□□□ 0.99
CLN6-222ENST00000637667 MRPS21P82921 87 aaKnown RBP21.22■□□□□ 0.99
CLN6-222ENST00000637667 PLK5Q496M5 336 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 KRT39Q6A163 491 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 CLEC20AQ6ZU45 233 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 GPRIN1Q7Z2K8 1008 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 SFTPA1Q8IWL2 248 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 CCDC33Q8N5R6 958 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 WHAMMQ8TF30 809 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 JAKMIP2Q96AA8 810 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 CYFIP2Q96F07 1278 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 DUSP9Q99956 384 aaKnown RBP21.22■□□□□ 0.99
CLN6-222ENST00000637667 ARHGEF4Q9NR80 690 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 MMP17Q9ULZ9 603 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 SCML2Q9UQR0 700 aa21.22■□□□□ 0.99
CLN6-222ENST00000637667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.21■□□□□ 0.99
CLN6-222ENST00000637667 HHLA1C9JL84 531 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 GRIA2P42262 883 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 DGKEP52429 567 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 GAD2Q05329 585 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 PNOCQ13519 176 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 BBS7Q8IWZ6 715 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 WBP2Q969T9 261 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 EEF2KMTQ96G04 330 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 DNAI2Q9GZS0 605 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 PCDHGA5Q9Y5G8 931 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 RALGAPA1Q6GYQ0 2036 aa21.21■□□□□ 0.99
CLN6-222ENST00000637667 A0A0A0MRY4 1105 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 DCLK1O15075 740 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 CETN3O15182 167 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 CYP26A1O43174 497 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 HOXC11O43248 304 aaPredicted RBP21.2■□□□□ 0.98
CLN6-222ENST00000637667 GDF9O60383 454 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 TBX18O95935 607 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 ZNF806P0C7X5 589 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 IRF1P10914 325 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 EPB41P11171 864 aaKnown RBP21.2■□□□□ 0.98
CLN6-222ENST00000637667 CHRM1P11229 460 aaPredicted RBP21.2■□□□□ 0.98
CLN6-222ENST00000637667 ACO1P21399 889 aaKnown RBP21.2■□□□□ 0.98
CLN6-222ENST00000637667 MXI1P50539 228 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 KDSRQ06136 332 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 ELF2Q15723 593 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 CCDC6Q16204 474 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 FMR1NBQ8N0W7 255 aaPredicted RBP21.2■□□□□ 0.98
CLN6-222ENST00000637667 SEMA4DQ92854 862 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 DUSP15Q9H1R2 295 aaPredicted RBP21.2■□□□□ 0.98
CLN6-222ENST00000637667 PNPLA8Q9NP80 782 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 CYLDQ9NQC7 956 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 RMND1Q9NWS8 449 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 PCDHA5Q9Y5H7 936 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 MYOFQ9NZM1 2061 aa21.2■□□□□ 0.98
CLN6-222ENST00000637667 STX10O60499 249 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 SF3A2Q15428 464 aaKnown RBP21.19■□□□□ 0.98
CLN6-222ENST00000637667 CRY1Q16526 586 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 HSF5Q4G112 596 aaPredicted RBP21.19■□□□□ 0.98
CLN6-222ENST00000637667 BTBD8Q5XKL5 378 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 ANO7Q6IWH7 933 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 RASSF3Q86WH2 238 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 ETFBKMTQ8IXQ9 262 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 PHTF2Q8N3S3 785 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 ALLCQ8N6M5 410 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 FAXDC2Q96IV6 333 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 CNOT6LQ96LI5 555 aaKnown RBP21.19■□□□□ 0.98
CLN6-222ENST00000637667 KLF16Q9BXK1 252 aaPredicted RBP21.19■□□□□ 0.98
CLN6-222ENST00000637667 SPHK2Q9NRA0 654 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 OSER1Q9NX31 292 aa21.19■□□□□ 0.98
CLN6-222ENST00000637667 MYO16Q9Y6X6 1858 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 GOLGA6L4A6NEF3 574 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 RHOBTB1O94844 696 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 KLF8O95600 359 aaPredicted RBP21.18■□□□□ 0.98
CLN6-222ENST00000637667 TIE1P35590 1138 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 ATP5C1P36542 298 aaKnown RBP21.18■□□□□ 0.98
CLN6-222ENST00000637667 MPLP40238 635 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 PRCPP42785 496 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 TNFRSF4P43489 277 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 KIF11P52732 1056 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 AASDHQ4L235 1098 aaPredicted RBP21.18■□□□□ 0.98
CLN6-222ENST00000637667 USP39Q53GS9 565 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms