RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ZNF217O75362 1048 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 TULP3O75386 442 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 YEATS4O95619 227 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 SERPINF2P08697 491 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 ENGP17813 658 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 NTSR1P30989 418 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 CDH8P55286 799 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 ASIC1P78348 528 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 DUOXA1Q1HG43 343 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 LYSMD4Q5XG99 296 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 BTBD8Q5XKL5 378 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 KLHDC10Q6PID8 442 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 SHC4Q6S5L8 630 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 UNC93AQ86WB7 457 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 TMEM25Q86YD3 366 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 SLC9A9Q8IVB4 645 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 TMEFF1Q8IYR6 380 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 ZNF276Q8N554 614 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 GOLGA5Q8TBA6 731 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 PARD3BQ8TEW8 1205 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 HMGB4Q8WW32 186 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 SCNM1Q9BWG6 230 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 KLF16Q9BXK1 252 aaPredicted RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 ADAM33Q9BZ11 813 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 FBXO44Q9H4M3 255 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 SLC32A1Q9H598 525 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 CAPN10Q9HC96 672 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 DMAP1Q9NPF5 467 aaPredicted RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 WDR35Q9P2L0 1181 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 FBXO10Q9UK96 956 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 SLC6A14Q9UN76 642 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 SH3BP1Q9Y3L3 701 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 NEUROG3Q9Y4Z2 214 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 MYO16Q9Y6X6 1858 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 MAP1BP46821 2468 aaKnown RBP9.33□□□□□ -0.92
CLN8-214ENST00000637594 PTPRDP23468 1912 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 TCRBV21S2A2A0A5A6 115 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 H0Y626 953 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 GFRA2O00451 464 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 IKBKBO14920 756 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 CACNG3O60359 315 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 PHACTR2O75167 634 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 TRIM16O95361 564 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 VNN1O95497 513 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 CISD3P0C7P0 127 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 GABRG2P18507 467 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 ITPKAP23677 461 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 CYP2J2P51589 502 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 SLC5A3P53794 718 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 FOXC1Q12948 553 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 SLC14A1Q13336 389 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 HNRNPDQ14103 355 aaKnown RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 STK38Q15208 465 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 SGSM1Q2NKQ1 1148 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 ZNF667Q5HYK9 610 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 FAM35AQ86V20 835 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 BBS7Q8IWZ6 715 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 FUKQ8N0W3 1084 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 TERB1Q8NA31 727 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 ZMIZ2Q8NF64 920 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 PLEKHO2Q8TD55 490 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 TAF4BQ92750 862 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 DHX58Q96C10 678 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 SMARCD1Q96GM5 515 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 ZNF419Q96HQ0 510 aaPredicted RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 ZNF396Q96N95 335 aaPredicted RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 SMOQ99835 787 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 GABRG3Q99928 467 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 CCSER2Q9H7U1 834 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 CYLDQ9NQC7 956 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 BCCIPQ9P287 314 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLN8-214ENST00000637594 SCML2Q9UQR0 700 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
CLN8-214ENST00000637594 HELZP42694 1942 aaKnown RBP9.32□□□□□ -0.92
CLN8-214ENST00000637594 NUP205Q92621 2012 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 USP24Q9UPU5 2620 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 IGHV1OR15-9A0A0B4J2B8 117 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 A0A1W2PQD8 194 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 LRRIQ3A6PVS8 624 aaPredicted RBP9.31□□□□□ -0.92
CLN8-214ENST00000637594 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 TLR5O60602 858 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 EXOC3O60645 756 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 AP1G2O75843 785 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 BEST1O76090 585 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 TOP3BO95985 862 aaKnown RBP9.31□□□□□ -0.92
CLN8-214ENST00000637594 CAPNS1P04632 268 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 P4HA1P13674 534 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 ATP5C1P36542 298 aaKnown RBP9.31□□□□□ -0.92
CLN8-214ENST00000637594 PGFP49763 221 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 ZNF132P52740 706 aa9.31□□□□□ -0.92
CLN8-214ENST00000637594 GFPT1Q06210 699 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms