RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 CAVIN2O95810 425 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 PAEPP09466 180 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 SLC9A1P19634 815 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 DDX6P26196 483 aaKnown RBP eCLIP17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 PON1P27169 355 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 ADORA2BP29275 332 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 ZNF165P49910 485 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 TEAD2Q15562 447 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 ARHGAP15Q53QZ3 475 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 STPG1Q5TH74 334 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 KAT5Q92993 513 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 KREMEN1Q96MU8 473 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 ATXN3LQ9H3M9 355 aa17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 LIMA1Q9UHB6 759 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-229ENST00000636670 TAF4O00268 1085 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 RTN3O95197 1032 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 F11P03951 625 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 ZNF806P0C7X5 589 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 GJA1P17302 382 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 ZNF132P52740 706 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 MFAP3P55082 362 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 SGO2Q562F6 1265 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 PPP1R26Q5T8A7 1209 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 TMEM270Q6UE05 265 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 CLEC20AQ6ZU45 233 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 RRAGAQ7L523 313 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 FAM160A2Q8N612 972 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 RBBP8NLQ8NC74 664 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 ZMIZ2Q8NF64 920 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 DNASE1L2Q92874 299 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 HEXIM2Q96MH2 286 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 SMOQ99835 787 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 SLITRK6Q9H5Y7 841 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 SIX2Q9NPC8 291 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 CNTN6Q9UQ52 1028 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 PCDHB4Q9Y5E5 795 aa17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 GCN1Q92616 2671 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-229ENST00000636670 CHURC1-FNTBB4DL54 471 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 ECI2O75521 394 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 VDRP11473 427 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 FNTBP49356 437 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 COPB1P53618 953 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 SLC5A3P53794 718 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 CYP4F8P98187 520 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 SF3A2Q15428 464 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 PSAPL1Q6NUJ1 521 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 TMEM150AQ86TG1 271 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 MRPS31Q92665 395 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 MCRS1Q96EZ8 462 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 ASB16Q96NS5 453 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 TRPV4Q9HBA0 871 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 UBE2TQ9NPD8 197 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 RXFP3Q9NSD7 469 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 COMMD8Q9NX08 183 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 KIAA1257Q9ULG3 409 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 NCANO14594 1321 aa17.1■□□□□ 0.33
CACNA1A-229ENST00000636670 LGALS16A8MUM7 142 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 TNFRSF10BO14763 440 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 CD19P15391 556 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 FCARP24071 287 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 WEE1P30291 646 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 PPP3CCP48454 512 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 BCAT1P54687 386 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 USP46P62068 366 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 IQCB1Q15051 598 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 STILQ15468 1287 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 STXBP5Q5T5C0 1151 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 GPR158Q5T848 1215 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 PDZD8Q8NEN9 1154 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 ZSCAN18Q8TBC5 510 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 OVCA2Q8WZ82 227 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 SHC3Q92529 594 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 SLITRK1Q96PX8 696 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 KCNK16Q96T55 309 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 DUSP16Q9BY84 665 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 VPS16Q9H269 839 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 TASP1Q9H6P5 420 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 TSPAN16Q9UKR8 245 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 DAAM1Q9Y4D1 1078 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 F5P12259 2224 aa17.09■□□□□ 0.33
CACNA1A-229ENST00000636670 FAM92AA1XBS5 289 aa17.08■□□□□ 0.32
CACNA1A-229ENST00000636670 BECN2A8MW95 431 aa17.08■□□□□ 0.32
CACNA1A-229ENST00000636670 O00370 1275 aa17.08■□□□□ 0.32
CACNA1A-229ENST00000636670 BEST1O76090 585 aa17.08■□□□□ 0.32
CACNA1A-229ENST00000636670 PFKLP17858 780 aa17.08■□□□□ 0.32
CACNA1A-229ENST00000636670 CDK11BP21127 795 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms