RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 OTOAQ7RTW8 1153 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 TMPRSS6Q8IU80 811 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 SRRM1Q8IYB3 904 aaKnown RBP8.3□□□□□ -1.08
PCCA-212ENST00000636420 ZDHHC14Q8IZN3 488 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 SYT2Q8N9I0 419 aaPredicted RBP8.3□□□□□ -1.08
PCCA-212ENST00000636420 CHST13Q8NET6 341 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 GDAP1Q8TB36 358 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 HAS1Q92839 578 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 MCUR1Q96AQ8 359 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 DGCR14Q96DF8 476 aaKnown RBP8.3□□□□□ -1.08
PCCA-212ENST00000636420 ARHGEF26Q96DR7 871 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 ZFRQ96KR1 1074 aaKnown RBP8.3□□□□□ -1.08
PCCA-212ENST00000636420 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
PCCA-212ENST00000636420 TMEM47Q9BQJ4 181 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 SIKE1Q9BRV8 207 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 TRIM55Q9BYV6 548 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 THAP2Q9H0W7 228 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 DMAC2Q9NW81 257 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 NDE1Q9NXR1 346 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 CLDND1Q9NY35 253 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 GGT7Q9UJ14 662 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 ANAPC5Q9UJX4 755 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 ZNF148Q9UQR1 794 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 MYO7AQ13402 2215 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 LCTP09848 1927 aa8.3□□□□□ -1.08
PCCA-212ENST00000636420 DNAH14Q0VDD8 3507 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 LOC730098B7Z3J9 87 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ANKRD63C9JTQ0 380 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 EDIL3O43854 480 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CIB2O75838 187 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 KRT36O76013 467 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 NDUFB10O96000 172 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 SNHG28P0DPA3 235 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 VAV1P15498 845 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CREB1P16220 341 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 COMTP21964 271 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 HOXD13P35453 343 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CDK8P49336 464 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 SNRPFP62306 86 aaKnown RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 PHEXP78562 749 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CDK16Q00536 496 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 HYAL1Q12794 435 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ZNF211Q13398 564 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 SMAD4Q13485 552 aaKnown RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 CBX2Q14781 532 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 CCNG2Q16589 344 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 USP41Q3LFD5 358 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 DUSP28Q4G0W2 176 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 C1QTNF12Q5T7M4 302 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 PPP1R2P3Q6NXS1 205 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 FAM117BQ6P1L5 589 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 DSTYKQ6XUX3 929 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.29□□□□□ -1.08
PCCA-212ENST00000636420 OTUD6AQ7L8S5 288 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 EEPD1Q7L9B9 569 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 VPS52Q8N1B4 723 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 RAB3IL1Q8TBN0 382 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CCDC110Q8TBZ0 833 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ZNF75CPQ92670 426 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 TRIM11Q96F44 468 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 MTG1Q9BT17 334 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 DHRS4Q9BTZ2 278 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 INTS2Q9H0H0 1204 aaKnown RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 TRABDQ9H4I3 376 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 NSUN3Q9H649 340 aaKnown RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 KANSL2Q9H9L4 492 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 KCND2Q9NZV8 630 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 FBXO40Q9UH90 709 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ASIC3Q9UHC3 531 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 DNAJC12Q9UKB3 198 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 AJAP1Q9UKB5 411 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 PCDHA12Q9UN75 941 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 WDR87Q6ZQQ6 2873 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 BAZ2BQ9UIF8 2168 aaKnown RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 ACACBO00763 2458 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ABHD14A-ACY1A0A1B0GW23 586 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ASB14A6NK59 587 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CASQ2O14958 399 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 LINC01565O15544 149 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ZNF862O60290 1169 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 TM7SF2O76062 418 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 CBX6O95503 412 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 TDP2O95551 362 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 PDGFBP01127 241 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 MYL3P08590 195 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 FAM163BP0C2L3 166 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 DHRS4L1P0CG22 281 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 MYBL1P10243 752 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 PYGMP11217 842 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 ANPEPP15144 967 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 RPA1P27694 616 aa8.29□□□□□ -1.08
PCCA-212ENST00000636420 TPP2P29144 1249 aaPredicted RBP8.29□□□□□ -1.08
PCCA-212ENST00000636420 ITGA8P53708 1063 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms