RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 LYNP07948 512 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PAX3P23760 479 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RCVRNP35243 200 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 XRCC4Q13426 336 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 BYSLQ13895 437 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 QRICH1Q2TAL8 776 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PPM1LQ5SGD2 360 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PRPF39Q86UA1 669 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 STX12Q86Y82 276 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PEX5LQ8IYB4 626 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 FAR1Q8WVX9 515 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM159Q96B96 161 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 NACC2Q96BF6 587 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF512BQ96KM6 892 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RAD21L1Q9H4I0 556 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 FAM49BQ9NUQ9 324 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SPG21Q9NZD8 308 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 POLG2Q9UHN1 485 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TSC22D4Q9Y3Q8 395 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 NPHP4O75161 1426 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 UGGT1Q9NYU2 1555 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 EXTL3O43909 919 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MFN2O95140 757 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TLX1P31314 330 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 LHX1P48742 406 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ELAVL2Q12926 359 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SETMARQ53H47 684 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ARSJQ5FYB0 599 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF677Q86XU0 584 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MIER2Q8N344 545 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 FRMD8Q9BZ67 464 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 YIPF3Q9GZM5 350 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ILKAPQ9H0C8 392 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ELOVL6Q9H5J4 265 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ALG13Q9NP73 1137 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 AP4S1Q9Y587 144 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PTPRKQ15262 1439 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RBMXL2O75526 392 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 STX11O75558 287 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 OR6B1O95007 311 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PSMD4P55036 377 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RHOAP61586 193 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 MAD2L1Q13257 205 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ANGEL2Q5VTE6 544 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 FOXR1Q6PIV2 292 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 CD302Q8IX05 232 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RIBC1Q8N443 379 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DPY30Q9C005 99 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 EPB41L4BQ9H329 900 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ABCB6Q9NP58 842 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 KLHL1Q9NR64 748 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 NCF1BA6NI72 391 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 NCF1CA8MVU1 366 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PRODHO43272 600 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 KRT34O76011 436 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 THP07101 528 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 CYP21A2P08686 494 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 NCF1P14598 390 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ITIH2P19823 946 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PEX5P50542 639 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ILF2Q12905 390 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 SNRNP35Q16560 246 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DGKKQ5KSL6 1271 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PRR23CQ6ZRP0 262 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 STARD8Q92502 1023 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RERGQ96A58 199 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ELL3Q9HB65 397 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DDIT4Q9NX09 232 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 M0QYT0 321 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ZBTB39O15060 712 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 SNPHO15079 494 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PHF2O75151 1096 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 HSMCR30P0CW71 290 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 FGFR4P22455 802 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 C2CD6Q53TS8 623 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 TRPC4APQ8TEL6 797 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RNPC3Q96LT9 517 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 BTBD9Q96Q07 612 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 FBXO44Q9H4M3 255 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DNAJC11Q9NVH1 559 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PSME2Q9UL46 239 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 EFCAB6Q5THR3 1501 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ABCC2Q92887 1545 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 VGLL3A8MV65 326 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF682O95780 498 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 F9P00740 461 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 NR3C2P08235 984 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 POLR2EP19388 210 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RPS12P25398 132 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 BAATQ14032 418 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 SPIDRQ14159 915 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC14Q15048 493 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ATP6AP1LQ52LC2 224 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ARMC3Q5W041 872 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DEFB128Q7Z7B8 93 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PARP9Q8IXQ6 854 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 CYP4X1Q8N118 509 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 C3orf20Q8ND61 904 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms