RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ARHGAP26Q9UNA1 814 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 A0A1W2PQC6 194 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 A0A1W2PQH9 124 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 TMEM221A6NGB7 291 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 M0R296 226 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 ARNTLO00327 626 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CYP11B1P15538 503 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 TCF3P15923 654 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 GDI1P31150 447 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 SOX5P35711 763 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 RGS7P49802 495 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 ADIGQ0VDE8 80 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 BHLHA9Q7RTU4 235 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 SCML4Q8N228 414 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 DDX1Q92499 740 aaKnown RBP10.24□□□□□ -0.77
LINC00339-210ENST00000635675 NDRG1Q92597 394 aaKnown RBP10.24□□□□□ -0.77
LINC00339-210ENST00000635675 C1QTNF1Q9BXJ1 281 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 ULBP1Q9BZM6 244 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 RBSNQ9H1K0 784 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 LHX5Q9H2C1 402 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 BRD9Q9H8M2 597 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 TRPV5Q9NQA5 729 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CNGB3Q9NQW8 809 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CLIC5Q9NZA1 410 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CYTH4Q9UIA0 394 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 MYO16Q9Y6X6 1858 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 ZNF263O14978 683 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 CHADO15335 359 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 TLR5O60602 858 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 TBX18O95935 607 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 RARGP13631 454 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 LCP1P13796 627 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 KRT9P35527 623 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 STAT1P42224 750 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 UBASH3AP57075 661 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 PFKPQ01813 784 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 USP4Q13107 963 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 ZNF77Q15935 545 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 ARHGAP29Q52LW3 1261 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 IER5LQ5T953 404 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 KLHDC10Q6PID8 442 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 BMP8AQ7Z5Y6 402 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 TMEM110Q86TL2 294 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 YAF2Q8IY57 180 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 SIX6OS1Q8N1H7 587 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 ARHGAP18Q8N392 663 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 SH3RF2Q8TEC5 729 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 DNASE1L2Q92874 299 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 IRF7Q92985 503 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 ZFRQ96KR1 1074 aaKnown RBP10.23□□□□□ -0.77
LINC00339-210ENST00000635675 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 FAM83CQ9BQN1 747 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 GKN1Q9NS71 199 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 THG1LQ9NWX6 298 aaKnown RBP10.23□□□□□ -0.77
LINC00339-210ENST00000635675 NAGPAQ9UK23 515 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 FBXL21Q9UKT6 434 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 CPQQ9Y646 472 aa10.23□□□□□ -0.77
LINC00339-210ENST00000635675 HELZP42694 1942 aaKnown RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 KIF26AQ9ULI4 1882 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 KRBA1A5PL33 1030 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 FAM86C2PA6NEL3 165 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 YJEFN3A6XGL0 299 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 E7ENQ6 273 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 LEFTY2O00292 366 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 PIK3R2O00459 728 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 GFPT2O94808 682 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 FBXO21O94952 628 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 MBL2P11226 248 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 CDH5P33151 784 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 ATP5C1P36542 298 aaKnown RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 PBX1P40424 430 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 ACADSBP45954 432 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 DAOAP59103 153 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 YWHAGP61981 247 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 PLCB2Q00722 1185 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 PDCLQ13371 301 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 SLC44A4Q53GD3 710 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 TMEM31Q5JXX7 168 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 NOP9Q86U38 636 aaKnown RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 SCUBE3Q8IX30 993 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 SIX5Q8N196 739 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 KIAA1958Q8N8K9 716 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 EPS8L1Q8TE68 723 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 IRGQQ8WZA9 623 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 BAP1Q92560 729 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 ZFYVE19Q96K21 471 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 ST7Q9NRC1 585 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 SMPD4Q9NXE4 827 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 NOCTQ9UK39 431 aaKnown RBP10.22□□□□□ -0.77
LINC00339-210ENST00000635675 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 CA14Q9ULX7 337 aa10.22□□□□□ -0.77
LINC00339-210ENST00000635675 COL4A2P08572 1712 aa10.21□□□□□ -0.77
LINC00339-210ENST00000635675 SHISA7A6NL88 538 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 PRR33A8MZF0 331 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 PDGFBP01127 241 aaPredicted RBP10.21□□□□□ -0.78
LINC00339-210ENST00000635675 RALAP11233 206 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CHRNB2P17787 502 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 MLLT6P55198 1093 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms