RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 THAP4Q8WY91 577 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 ATG4AQ8WYN0 398 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 HERVK_113Q902F9 699 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 MPP4Q96JB8 637 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 PPM1MQ96MI6 270 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 HIST1H2AAQ96QV6 131 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 NUDT22Q9BRQ3 303 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 GALNT9Q9HCQ5 603 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 RIMKLBQ9ULI2 386 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 ARHGEF11O15085 1522 aa6.99□□□□□ -1.29
SMARCA2-240ENST00000635392 PRXQ9BXM0 1461 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 PRKCBP05771 671 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 JUPP14923 745 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 SEC24CP53992 1094 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 SLC25A3Q00325 362 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 MTAPQ13126 283 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 RESTQ13127 1097 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 R3HDM1Q15032 1099 aaKnown RBP6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 MAPRE1Q15691 268 aaKnown RBP6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 LRRTM4Q86VH4 590 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 CCDC117Q8IWD4 279 aaPredicted RBP6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 NRSN1Q8IZ57 195 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 METTL25Q8N6Q8 603 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 ABHD5Q8WTS1 349 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 FAM136AQ96C01 138 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 SDCCAG3Q96C92 435 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 RNF31Q96EP0 1072 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 HAPLN3Q96S86 360 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 ADOQ96SZ5 270 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 C17orf80Q9BSJ5 609 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 ALOXE3Q9BYJ1 711 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 VPS16Q9H269 839 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 INTS13Q9NVM9 706 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 SLC27A6Q9Y2P4 619 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 CRYL1Q9Y2S2 319 aa6.98□□□□□ -1.29
SMARCA2-240ENST00000635392 HMX3A6NHT5 357 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 H0Y3Z8 333 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 PPM1DO15297 605 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 PDHA1P08559 390 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 PRKAR1BP31321 381 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 BMPR1AP36894 532 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 ATXN1P54253 815 aaKnown RBP6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 TIRAPP58753 221 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 TBX2Q13207 712 aaPredicted RBP6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 CRHR2Q13324 411 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 ACOX1Q15067 660 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 CEP170Q5SW79 1584 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 TTC22Q5TAA0 569 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 DTX2Q86UW9 622 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 IZUMO1Q8IYV9 350 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 GRAMD1AQ96CP6 724 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 RIC8AQ9NPQ8 531 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 VPS45Q9NRW7 570 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 CEP72Q9P209 647 aa6.97□□□□□ -1.29
SMARCA2-240ENST00000635392 RUSC2Q8N2Y8 1516 aa6.96□□□□□ -1.29
SMARCA2-240ENST00000635392 PNMA6EA0A0J9YXQ4 647 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 TMEM200CA6NKL6 621 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 ZSCAN9O15535 394 aaPredicted RBP6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 POLBP06746 335 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 RBL1P28749 1068 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 EPHA3P29320 983 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 ZEB1P37275 1124 aaPredicted RBP6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 CDK7P50613 346 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 BTBD16Q32M84 506 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 HS1BP3Q53T59 392 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 DEPDC1Q5TB30 811 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 ATPAF1Q5TC12 328 aaPredicted RBP6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 SLC9A4Q6AI14 798 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 OR6Y1Q8NGX8 325 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 SLC30A5Q8TAD4 765 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 OSCP1Q8WVF1 389 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 RUBCNQ92622 972 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 PYM1Q9BRP8 204 aaKnown RBP6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 VN1R3Q9BXE9 311 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 KLC2Q9H0B6 622 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 ZNF703Q9H7S9 590 aaPredicted RBP6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 CNTN6Q9UQ52 1028 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 NOX1Q9Y5S8 564 aa6.96□□□□□ -1.3
SMARCA2-240ENST00000635392 PRG4Q92954 1404 aaPredicted RBP6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 RIMBP3CA6NJZ7 1639 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 RIMBP3BA6NNM3 1639 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 RIMBP3Q9UFD9 1639 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 J3KRW8 73 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 FAM20BO75063 409 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 NDUFA10O95299 355 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 VNN1O95497 513 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 TK1P04183 234 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 PPP3CBP16298 524 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 CNTFP26441 200 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 ADAM17P78536 824 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 CLCA4Q14CN2 919 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 TAF12Q16514 161 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 SLC4A8Q2Y0W8 1093 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 ADCK5Q3MIX3 580 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 RINT1Q6NUQ1 792 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 ARMC6Q6NXE6 501 aa6.95□□□□□ -1.3
SMARCA2-240ENST00000635392 MSANTD2Q6P1R3 559 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms