RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 FYNP06241 537 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 GYS1P13807 737 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 RHOAP61586 193 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 SGCGQ13326 291 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 SHROOM1Q2M3G4 852 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 NSL1Q96IY1 281 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 CCT7Q99832 543 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 TRPC4Q9UBN4 977 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 CYP11B2P19099 503 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 TFE3P19532 575 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 GARTP22102 1010 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 GTF2E2P29084 291 aaKnown RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 TGM3Q08188 693 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 CASP10Q92851 521 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 OSMRQ99650 979 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 PIF1Q9H611 641 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 SDR42E2A6NKP2 422 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 NTSR2O95665 410 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 MSH3P20585 1137 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 C16orf72Q14CZ0 275 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 NT5DC3Q86UY8 548 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 FAM111AQ96PZ2 611 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 CDK5RAP1Q96SZ6 601 aaKnown RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 ITGB6P18564 788 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 CAPRIN2Q6IMN6 1127 aaKnown RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 UTP6Q9NYH9 597 aaKnown RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 MYO10Q9HD67 2058 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 KIF20BQ96Q89 1820 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 A0A1B0GW55 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 TPST1O60507 370 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 CSF1RP07333 972 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 NFICP08651 508 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4L2P0CJ85 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4L3P0CJ86 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4L4P0CJ87 422 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4L5P0CJ88 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4L6P0CJ89 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4L7P0CJ90 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 YWHAQP27348 245 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 HALP42357 657 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 USP49Q70CQ1 688 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 TRMT11Q7Z4G4 463 aaKnown RBP12.12□□□□□ -0.47
SHPRH-211ENST00000629427 MICU2Q8IYU8 434 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 APOL2Q9BQE5 337 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 DUX4Q9UBX2 424 aa12.12□□□□□ -0.47
SHPRH-211ENST00000629427 GLP2RO95838 553 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 PDK2Q15119 407 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 LY6KQ17RY6 165 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 STRA8Q7Z7C7 330 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 CYP4Z1Q86W10 505 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 CAMKK1Q8N5S9 505 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 TFR2Q9UP52 801 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 E9PCH4 1651 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 E9PBE3 544 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 TK2O00142 265 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 KPNA6O60684 536 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 KCNA3P22001 575 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 DEFA1P59665 94 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 DEFA3P59666 94 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 SNTG2Q9NY99 539 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 NBNO60934 754 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 F9P00740 461 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 COPAP53621 1224 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 DNAJC3Q13217 504 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 KIF2BQ8N4N8 673 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 TSPAN3O60637 253 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 GYPCP04921 128 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 MAPK1P28482 360 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 ZNF280DQ6N043 979 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 DNAJB3Q8WWF6 145 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 PGLYRP2Q96PD5 576 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 DDX43Q9NXZ2 648 aaKnown RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 KIAA1257Q9ULG3 409 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 ENO2P09104 434 aaPredicted RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 POU1F1P28069 291 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 MLH1P40692 756 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 SCNN1BP51168 640 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 YWHAZP63104 245 aaKnown RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 KLC1Q07866 573 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 STX5Q13190 355 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 TMEM154Q6P9G4 183 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 FICDQ9BVA6 458 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 ITGALP20701 1170 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 PTAR1Q7Z6K3 402 aaPredicted RBP12.11□□□□□ -0.47
SHPRH-211ENST00000629427 USP38Q8NB14 1042 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 CSGALNACT1Q8TDX6 532 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 CYP39A1Q9NYL5 469 aa12.11□□□□□ -0.47
SHPRH-211ENST00000629427 ARP10275 920 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms