RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 ATXN8OSP0DMR3 200 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 IRF1P10914 325 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 CDK4P11802 303 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 YWHAQP27348 245 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 PRPHP41219 470 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 UBA7P41226 1012 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 GRK6P43250 576 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 CSNK1EP49674 416 aaKnown RBP8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 AFF3P51826 1226 aaKnown RBP8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 PSMC1P62191 440 aaKnown RBP8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 CXADRP78310 365 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 ZXDBP98169 803 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 ARID5AQ03989 594 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 MESP2Q0VG99 397 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 GAB4Q2WGN9 574 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 HECTD3Q5T447 861 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 EGFLAMQ63HQ2 1017 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 TPGS1Q6ZTW0 290 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 DPH6Q7L8W6 267 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 LRRC52Q8N7C0 313 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 C4orf32Q8N8J7 132 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 PDZD8Q8NEN9 1154 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 UCMAQ8WVF2 138 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 DNASE2BQ8WZ79 361 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 PRCCQ92733 491 aaPredicted RBP8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 MYLPFQ96A32 169 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 SKA1Q96BD8 255 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 SIPA1Q96FS4 1042 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 MRGPRX1Q96LB2 322 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 FAM213AQ9BRX8 229 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 BBS2Q9BXC9 721 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 LSM7Q9UK45 103 aaKnown RBP8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 ITGA11Q9UKX5 1188 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 STARD13Q9Y3M8 1113 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 NFE2L3Q9Y4A8 694 aa8.12□□□□□ -1.11
SPTAN1-215ENST00000628867 ITPR1Q14643 2758 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 HELZ2Q9BYK8 2649 aaKnown RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 A0A1W2PQF6 199 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 VWA3AA6NCI4 1184 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 METTL12A8MUP2 240 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 F8VP50 259 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 GFRA2O00451 464 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 ARHGAP6O43182 974 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 FAM189A1O60320 539 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 ATP2C2O75185 946 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 C1QL1O75973 258 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 PRPF6O94906 941 aaKnown RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 RTN3O95197 1032 aaPredicted RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 TNNC2P02585 160 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 DGKGP49619 791 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 NEK4P51957 841 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 SLC12A3P55017 1021 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 C21orf59P57076 290 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 USP46P62068 366 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 NOP14P78316 857 aaKnown RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 SMAD1Q15797 465 aaKnown RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 C8orf34Q49A92 452 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 BROXQ5VW32 411 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 MCTP1Q6DN14 999 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 FAM171BQ6P995 826 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 FAM124AQ86V42 546 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 TMEM25Q86YD3 366 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 TMPRSS6Q8IU80 811 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 CCDC83Q8IWF9 413 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 BBS7Q8IWZ6 715 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 NUP93Q8N1F7 819 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 OR6B3Q8NGW1 331 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 FBXO32Q969P5 355 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 HPDLQ96IR7 371 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 ANKRD36BP1Q96IX9 119 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 C8orf48Q96LL4 319 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 ACOX2Q99424 681 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 REEP2Q9BRK0 252 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 SLC6A17Q9H1V8 727 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 PRORYQ9H606 182 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 WSB2Q9NYS7 404 aaPredicted RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 CHORDC1Q9UHD1 332 aaPredicted RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 FNDC3AQ9Y2H6 1198 aaKnown RBP8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 APC2O95996 2303 aa8.11□□□□□ -1.11
SPTAN1-215ENST00000628867 WASH3PC4AMC7 463 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 GABRDO14764 452 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 NPC1O15118 1278 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 TRIM24O15164 1050 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 DFNA5O60443 496 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 OAS1P00973 400 aaKnown RBP8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 TYRP14679 529 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 ABCB4P21439 1286 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 LMO2P25791 158 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 ACTN2P35609 894 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 CCT8P50990 548 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 ZNF132P52740 706 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 HMGN5P82970 282 aaKnown RBP8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 GTF2BQ00403 316 aa8.1□□□□□ -1.11
SPTAN1-215ENST00000628867 CCDC173Q0VFZ6 552 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms