RNA–Protein interactions for RNA: ENST00000628863.2

RABEPK-206, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 5 BASIC

Gene RABEPK, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-206ENST00000628863 TRIM66O15016 1216 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 PCDHGA12O60330 932 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 PPP3CCP48454 512 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 CSNK1EP49674 416 aaKnown RBP16.05■□□□□ 0.16
RABEPK-206ENST00000628863 TMEM25Q86YD3 366 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 SPACA3Q8IXA5 215 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 TMEM86AQ8N2M4 240 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 ZFRQ96KR1 1074 aaKnown RBP16.05■□□□□ 0.16
RABEPK-206ENST00000628863 ZNF560Q96MR9 790 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 DUSP9Q99956 384 aaKnown RBP16.05■□□□□ 0.16
RABEPK-206ENST00000628863 IGSF5Q9NSI5 407 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 PCDHGA1Q9Y5H4 931 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 SNX11Q9Y5W9 270 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 SLCO1B1Q9Y6L6 691 aa16.05■□□□□ 0.16
RABEPK-206ENST00000628863 PRRT4C9JH25 899 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 GFRA2O00451 464 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 PNPLA4P41247 253 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 RHDQ02161 417 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 MMTAG2Q9BU76 263 aaKnown RBP16.04■□□□□ 0.16
RABEPK-206ENST00000628863 SPHK2Q9NRA0 654 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 DACH1Q9UI36 760 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 PCDHB6Q9Y5E3 794 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 BOD1L1Q8NFC6 3051 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 WASH3PC4AMC7 463 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 HUS1O60921 280 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 ATP2C2O75185 946 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 MBL2P11226 248 aaPredicted RBP16.04■□□□□ 0.16
RABEPK-206ENST00000628863 C6P13671 934 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 HNF1BP35680 557 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 IL12RB1P42701 662 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 TARDBPQ13148 414 aaKnown RBP eCLIP16.04■□□□□ 0.16
RABEPK-206ENST00000628863 SF3A1Q15459 793 aaKnown RBP16.04■□□□□ 0.16
RABEPK-206ENST00000628863 PKDCCQ504Y2 493 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 SCARA3Q6AZY7 606 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 GRAMD4Q6IC98 578 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 SYT2Q8N9I0 419 aaPredicted RBP16.04■□□□□ 0.16
RABEPK-206ENST00000628863 ENGASEQ8NFI3 743 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 TMEM176AQ96HP8 235 aa16.04■□□□□ 0.16
RABEPK-206ENST00000628863 LARSQ9P2J5 1176 aaKnown RBP16.04■□□□□ 0.16
RABEPK-206ENST00000628863 BSNQ9UPA5 3926 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 NBPF19A0A087WUL8 3843 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 NPHP3-ACAD11A0A0J9YXS1 232 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 KCNK3O14649 394 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 REC8O95072 547 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 ABL1P00519 1130 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 BDNFP23560 247 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 GRIK1P39086 918 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
RABEPK-206ENST00000628863 POU5F1Q01860 360 aaKnown RBP16.03■□□□□ 0.16
RABEPK-206ENST00000628863 CCDC173Q0VFZ6 552 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 NUMA1Q14980 2115 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 ANO4Q32M45 955 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 TTC38Q5R3I4 469 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 CRELD2Q6UXH1 353 aaPredicted RBP16.03■□□□□ 0.16
RABEPK-206ENST00000628863 C4orf50Q6ZRC1 276 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 BBS7Q8IWZ6 715 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 NSUN7Q8NE18 718 aaKnown RBP16.03■□□□□ 0.16
RABEPK-206ENST00000628863 MKRN2Q9H000 416 aaKnown RBP16.03■□□□□ 0.16
RABEPK-206ENST00000628863 GDAP2Q9NXN4 497 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 EHD2Q9NZN4 543 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 MAGEC2Q9UBF1 373 aaPredicted RBP16.03■□□□□ 0.16
RABEPK-206ENST00000628863 FTSJ1Q9UET6 329 aa16.03■□□□□ 0.16
RABEPK-206ENST00000628863 DOPEY2Q9Y3R5 2298 aa16.02■□□□□ 0.16
RABEPK-206ENST00000628863 FLNCQ14315 2725 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.02■□□□□ 0.15
RABEPK-206ENST00000628863 ANKRD63C9JTQ0 380 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 PAPSS1O43252 624 aaPredicted RBP16.02■□□□□ 0.15
RABEPK-206ENST00000628863 IGLV3-19P01714 112 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 PCSK1P29120 753 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 OXTRP30559 389 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 POLR2BP30876 1174 aaKnown RBP16.02■□□□□ 0.15
RABEPK-206ENST00000628863 LHX1P48742 406 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 TPMTP51580 245 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 AFF3P51826 1226 aaKnown RBP16.02■□□□□ 0.15
RABEPK-206ENST00000628863 SLC12A3P55017 1021 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 KCNH2Q12809 1159 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 TAF10Q12962 218 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 TRIM29Q14134 588 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 LY6DQ14210 128 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 FUT11Q495W5 492 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 ARSHQ5FYA8 562 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 ERICH1Q86X53 443 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 NT5DC4Q86YG4 428 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 CXorf38Q8TB03 319 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 IGSF8Q969P0 613 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 WBP2Q969T9 261 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 MYLPFQ96A32 169 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 DNAJC17Q9NVM6 304 aaKnown RBP16.02■□□□□ 0.15
RABEPK-206ENST00000628863 ANKRD6Q9Y2G4 727 aa16.02■□□□□ 0.15
RABEPK-206ENST00000628863 H0Y8X5 98 aa16.01■□□□□ 0.15
RABEPK-206ENST00000628863 EPB41L2O43491 1005 aaKnown RBP16.01■□□□□ 0.15
RABEPK-206ENST00000628863 BRINP1O60477 761 aa16.01■□□□□ 0.15
RABEPK-206ENST00000628863 JAK2O60674 1132 aa16.01■□□□□ 0.15
RABEPK-206ENST00000628863 CSRP3P50461 194 aa16.01■□□□□ 0.15
RABEPK-206ENST00000628863 CCT8P50990 548 aa16.01■□□□□ 0.15
RABEPK-206ENST00000628863 IL17AQ16552 155 aa16.01■□□□□ 0.15
RABEPK-206ENST00000628863 ADGRF2Q8IZF7 708 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms