RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PIRO00625 290 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 NDC80O14777 642 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 HCRTO43612 131 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 CILPO75339 1184 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 SKOR1P84550 965 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 INTS6LQ5JSJ4 861 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZNF598Q86UK7 904 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 PCDHB18PQ96TA0 734 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 FERMT1Q9BQL6 677 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 SPTLC1O15269 473 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 MAN1A1P33908 653 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 FLT3P36888 993 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 CUL1Q13616 776 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 DENND5BQ6ZUT9 1274 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM35AQ86V20 835 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 CCDC77Q9BR77 488 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ABLIM1O14639 778 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 SOD2P04179 222 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 NPR3P17342 541 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 GBP2P32456 591 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZNF564Q8TBZ8 553 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 SPPL2BQ8TCT7 592 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ALG3Q92685 438 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ACBD6Q9BR61 282 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 TXLNGYQ9BZA5 131 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZWILCHQ9H900 591 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 PARVAQ9NVD7 372 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 BCCIPQ9P287 314 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 STK39Q9UEW8 545 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
SYNGAP1-207ENST00000628646 YWHAQP27348 245 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM189BP81408 668 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 DENND1BQ6P3S1 775 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 YAF2Q8IY57 180 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM71AQ8IYT1 594 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 MCEEQ96PE7 176 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 LRRC4CQ9HCJ2 640 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 WDR35Q9P2L0 1181 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 GAS8O95995 478 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 ENPEPQ07075 957 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 CNGA2Q16280 664 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 ARL13BQ3SXY8 428 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 PIGZQ86VD9 579 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 EPS8L1Q8TE68 723 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 GDPD5Q8WTR4 605 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 TSPYL1Q9H0U9 437 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 HMGXB4Q9UGU5 601 aa13.02□□□□□ -0.32
SYNGAP1-207ENST00000628646 STK25O00506 426 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 SOAT2O75908 522 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 MYBL1P10243 752 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 ASPAP45381 313 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 IRAK1P51617 712 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 MYCBPAPQ8TBZ2 947 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 EDEM1Q92611 657 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 DDX47Q9H0S4 455 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 METTL5Q9NRN9 209 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 APOEP02649 317 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 NRIP1P48552 1158 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 EFHC1Q5JVL4 640 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 PDZD4Q76G19 769 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 GRK7Q8WTQ7 553 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 CD101Q93033 1021 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 TRIM62Q9BVG3 475 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 SMPD4Q9NXE4 827 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 UVRAGQ9P2Y5 699 aa13.02□□□□□ -0.33
SYNGAP1-207ENST00000628646 TRIM66O15016 1216 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 CCL16O15467 120 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 KIAA0754O94854 1291 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 USP17L7P0C7H9 530 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 AVPR1AP37288 418 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 SULT1E1P49888 294 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 KAZNQ674X7 775 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 FBXO44Q9H4M3 255 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 ASNSD1Q9NWL6 643 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 RAD23BP54727 409 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 EFEMP1Q12805 493 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 UBLCP1Q8WVY7 318 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms