RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 DSTYKQ6XUX3 929 aa23.03■■□□□ 1.28
PNKP-220ENST00000627232 PAQR9Q6ZVX9 377 aa23.03■■□□□ 1.28
PNKP-220ENST00000627232 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.03■■□□□ 1.28
PNKP-220ENST00000627232 FAF2Q96CS3 445 aa23.03■■□□□ 1.28
PNKP-220ENST00000627232 SERPINB12Q96P63 405 aa23.03■■□□□ 1.28
PNKP-220ENST00000627232 ZNF670Q9BS34 389 aa23.03■■□□□ 1.28
PNKP-220ENST00000627232 PHACTR1Q9C0D0 580 aa23.03■■□□□ 1.28
PNKP-220ENST00000627232 CNOT10Q9H9A5 744 aaKnown RBP23.03■■□□□ 1.28
PNKP-220ENST00000627232 DAB1O75553 588 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 IFNB1P01574 187 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 ABHD2P08910 425 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 ACAT1P24752 427 aaKnown RBP23.02■■□□□ 1.28
PNKP-220ENST00000627232 STIP1P31948 543 aaKnown RBP23.02■■□□□ 1.28
PNKP-220ENST00000627232 CDR1P51861 262 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 KYNUQ16719 465 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 UPP1Q16831 310 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 DEFB115Q30KQ5 88 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 ANKRD20A8PQ5CZ79 823 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 P3H4Q92791 437 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 SYT15Q9BQS2 421 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 CRTAC1Q9NQ79 661 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 SLC12A6Q9UHW9 1150 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 CDH9Q9ULB4 789 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 NOD1Q9Y239 953 aa23.02■■□□□ 1.28
PNKP-220ENST00000627232 TSC2P49815 1807 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 TLDC2A0PJX2 215 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 ACSL3O95573 720 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 RBP3P10745 1247 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 IL4RP24394 825 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 MATKP42679 507 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 MAGEA4P43358 317 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 AFF1P51825 1210 aaKnown RBP23.01■■□□□ 1.27
PNKP-220ENST00000627232 ACLYP53396 1101 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 DPYSL2Q16555 572 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 CCDC142Q17RM4 750 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 MDH1BQ5I0G3 518 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 SLC9A4Q6AI14 798 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 CLEC20AQ6ZU45 233 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 TTC25Q96NG3 672 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 RBM15Q96T37 977 aaKnown RBP eCLIP23.01■■□□□ 1.277e-9■■■□□ 16.1
PNKP-220ENST00000627232 MED10Q9BTT4 135 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 OSBPL7Q9BZF2 842 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 FARP1Q9Y4F1 1045 aaPredicted RBP23.01■■□□□ 1.27
PNKP-220ENST00000627232 PTCH2Q9Y6C5 1203 aa23.01■■□□□ 1.27
PNKP-220ENST00000627232 APOL1O14791 398 aa23■■□□□ 1.27
PNKP-220ENST00000627232 FAM200BP0CF97 657 aa23■■□□□ 1.27
PNKP-220ENST00000627232 IGFBP6P24592 240 aaPredicted RBP23■■□□□ 1.27
PNKP-220ENST00000627232 MRPS5P82675 430 aaKnown RBP23■■□□□ 1.27
PNKP-220ENST00000627232 ROR1Q01973 937 aa23■■□□□ 1.27
PNKP-220ENST00000627232 ADCY1Q08828 1119 aa23■■□□□ 1.27
PNKP-220ENST00000627232 ADIGQ0VDE8 80 aa23■■□□□ 1.27
PNKP-220ENST00000627232 GRIK3Q13003 919 aa23■■□□□ 1.27
PNKP-220ENST00000627232 AUHQ13825 339 aaKnown RBP23■■□□□ 1.27
PNKP-220ENST00000627232 ZC3H12AQ5D1E8 599 aaKnown RBP23■■□□□ 1.27
PNKP-220ENST00000627232 KIAA0319Q5VV43 1072 aa23■■□□□ 1.27
PNKP-220ENST00000627232 PPIL6Q8IXY8 311 aa23■■□□□ 1.27
PNKP-220ENST00000627232 C3orf58Q8NDZ4 430 aa23■■□□□ 1.27
PNKP-220ENST00000627232 UHMK1Q8TAS1 419 aaKnown RBP23■■□□□ 1.27
PNKP-220ENST00000627232 EPS8L3Q8TE67 593 aaKnown RBP23■■□□□ 1.27
PNKP-220ENST00000627232 PXYLP1Q8TE99 480 aa23■■□□□ 1.27
PNKP-220ENST00000627232 PRCCQ92733 491 aaPredicted RBP23■■□□□ 1.27
PNKP-220ENST00000627232 ADAM2Q99965 735 aa23■■□□□ 1.27
PNKP-220ENST00000627232 TSEN34Q9BSV6 310 aaKnown RBP23■■□□□ 1.27
PNKP-220ENST00000627232 LRRC4Q9HBW1 653 aa23■■□□□ 1.27
PNKP-220ENST00000627232 GPATCH2LQ9NWQ4 482 aa23■■□□□ 1.27
PNKP-220ENST00000627232 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.99■■□□□ 1.27
PNKP-220ENST00000627232 CFAP69A5D8W1 941 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 MOXD2PA6NHM9 499 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 CLDN5O00501 218 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 FBXO21O94952 628 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 GNRH1P01148 92 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 PCSK1P29120 753 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 RPL22P35268 128 aaKnown RBP22.99■■□□□ 1.27
PNKP-220ENST00000627232 GDF10P55107 478 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 GUCY1A3Q02108 690 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 STAT4Q14765 748 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 UNC45BQ8IWX7 931 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 PQLC3Q8N755 202 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 PLD5Q8N7P1 536 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 PWWP2AQ96N64 755 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 UROC1Q96N76 676 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 PRDM16Q9HAZ2 1276 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 TRMT13Q9NUP7 481 aaKnown RBP22.99■■□□□ 1.27
PNKP-220ENST00000627232 DNAJC17Q9NVM6 304 aaKnown RBP22.99■■□□□ 1.27
PNKP-220ENST00000627232 CWC15Q9P013 229 aaKnown RBP22.99■■□□□ 1.27
PNKP-220ENST00000627232 CACNG4Q9UBN1 327 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 FRMPD3Q5JV73 1810 aa22.99■■□□□ 1.27
PNKP-220ENST00000627232 CASTOR2A6NHX0 329 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 DCDC2CA8MYV0 355 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 INPPL1O15357 1258 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 ODC1P11926 461 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 ZFXP17010 805 aaPredicted RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 TFE3P19532 575 aaPredicted RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 L1CAMP32004 1257 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 LSP1P33241 339 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 CA9Q16790 459 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 SLC25A52Q3SY17 297 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 DARS2Q6PI48 645 aaKnown RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 PSTKQ8IV42 348 aaKnown RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 CD99L2Q8TCZ2 262 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms