RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 AAGABQ6PD74 315 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 ZDHHC24Q6UX98 284 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 LPAR1Q92633 364 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 DACT3Q96B18 629 aaPredicted RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 PHACTR1Q9C0D0 580 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 PAIP1Q9H074 479 aaKnown RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 PALMDQ9NP74 551 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 DDX28Q9NUL7 540 aaKnown RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 LGALS13Q9UHV8 139 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 ATP11BQ9Y2G3 1177 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 SNX9Q9Y5X1 595 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 PIAS1O75925 651 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 ALDH1A3P47895 512 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 MAMLD1Q13495 774 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 KYAT3Q6YP21 454 aaKnown RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 RNF139Q8WU17 664 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 H0YGN5 161 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 TGM2P21980 687 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 PSMA4P25789 261 aaKnown RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 ATP13A4Q4VNC1 1196 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 KHDC1Q4VXA5 237 aaKnown RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 RFWD2Q8NHY2 731 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 STXBP5LQ9Y2K9 1186 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 NFS1Q9Y697 457 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 ABCC6O95255 1503 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 TIMM44O43615 452 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 GLRA2P23416 452 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 HMOX2P30519 316 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 AASDHQ4L235 1098 aaPredicted RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 METTL23Q86XA0 190 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 SKA2Q8WVK7 121 aaPredicted RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 CDRT15Q96T59 188 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 LRRC4CQ9HCJ2 640 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 CHKBQ9Y259 395 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 ANKRD63C9JTQ0 380 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 ME2P23368 584 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 SGF29Q96ES7 293 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 MYRFQ9Y2G1 1151 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 TBC1D4O60343 1298 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 CYP3A4P08684 503 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 GFAPP14136 432 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 TERB1Q8NA31 727 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 EZH1Q92800 747 aaPredicted RBP18.28■□□□□ 0.52
FARP1-242ENST00000627049 WNK4Q96J92 1243 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 PCDHB18PQ96TA0 734 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 GPATCH2LQ9NWQ4 482 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
FARP1-242ENST00000627049 PSMD3O43242 534 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 IL18RAPO95256 599 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 LRRC38Q5VT99 294 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 XRRA1Q6P2D8 792 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 TSHZ1Q6ZSZ6 1077 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 RNF148Q8N7C7 305 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 COPS7BQ9H9Q2 264 aaPredicted RBP18.28■□□□□ 0.52
FARP1-242ENST00000627049 APOC4-APOC2K7ER74 178 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 BANF1O75531 89 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 CALCAP01258 141 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 APOC2P02655 101 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 LYNP07948 512 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 TSHRP16473 764 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 LIN52Q52LA3 116 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 PLEKHA7Q6IQ23 1121 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 ALYREFQ86V81 257 aaKnown RBP18.28■□□□□ 0.52
FARP1-242ENST00000627049 PALB2Q86YC2 1186 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 ARHGEF38Q9NXL2 777 aa18.28■□□□□ 0.52
FARP1-242ENST00000627049 SAE1Q9UBE0 346 aaPredicted RBP18.28■□□□□ 0.52
FARP1-242ENST00000627049 SOX11P35716 441 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 MGAT5Q09328 741 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 KYAT1Q16773 422 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 TSPAN17Q96FV3 270 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 EPAS1Q99814 870 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 DCUN1D5Q9BTE7 237 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.27■□□□□ 0.52
FARP1-242ENST00000627049 XRN1Q8IZH2 1706 aaKnown RBP18.27■□□□□ 0.52
FARP1-242ENST00000627049 PEAK1Q9H792 1746 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 MEIS2O14770 477 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 VAV1P15498 845 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 MRPS22P82650 360 aaKnown RBP18.27■□□□□ 0.52
FARP1-242ENST00000627049 MRPS15P82914 257 aaKnown RBP18.27■□□□□ 0.52
FARP1-242ENST00000627049 UMODL1Q5DID0 1318 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 EMC10Q5UCC4 262 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 CLVS1Q8IUQ0 354 aaPredicted RBP18.27■□□□□ 0.52
FARP1-242ENST00000627049 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 SCHIP1Q9P0W5 487 aaPredicted RBP18.27■□□□□ 0.52
FARP1-242ENST00000627049 SLC17A7Q9P2U7 560 aa18.27■□□□□ 0.52
FARP1-242ENST00000627049 ICAM1P05362 532 aa18.27■□□□□ 0.51
FARP1-242ENST00000627049 ITGAVP06756 1048 aa18.27■□□□□ 0.51
FARP1-242ENST00000627049 MYL6P60660 151 aa18.27■□□□□ 0.51
FARP1-242ENST00000627049 TMEM132DQ14C87 1099 aa18.27■□□□□ 0.51
FARP1-242ENST00000627049 SLC5A9Q2M3M2 681 aa18.27■□□□□ 0.51
FARP1-242ENST00000627049 PATL1Q86TB9 770 aaKnown RBP18.27■□□□□ 0.51
FARP1-242ENST00000627049 RTKN2Q8IZC4 609 aa18.27■□□□□ 0.51
FARP1-242ENST00000627049 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.27■□□□□ 0.512e-6■■■■■ 43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms