RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PSMC2P35998 433 aaKnown RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 GRIK1P39086 918 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 PLA2G5P39877 138 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 CCR2P41597 374 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 CASP4P49662 377 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 VAMP7P51809 220 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 VCPP55072 806 aaKnown RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 GPLD1P80108 840 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 CYP27A1Q02318 531 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 SNW1Q13573 536 aaKnown RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 SGSM1Q2NKQ1 1148 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 SLC44A4Q53GD3 710 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 GPR158Q5T848 1215 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 ZNF658Q5TYW1 1059 aaPredicted RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 TANGO2Q6ICL3 276 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 INTS8Q75QN2 995 aaKnown RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 OSTM1Q86WC4 334 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 FAM186BQ8IYM0 893 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 TTC9BQ8N6N2 239 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 SHKBP1Q8TBC3 707 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 ZSCAN18Q8TBC5 510 aaPredicted RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 DEPDC1BQ8WUY9 529 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 TAF4BQ92750 862 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 FUBP3Q96I24 572 aaKnown RBP eCLIP6.82□□□□□ -1.32
TCF4-249ENST00000625716 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 SYT15Q9BQS2 421 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 DNAJC25Q9H1X3 360 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 MMRN2Q9H8L6 949 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 BRD9Q9H8M2 597 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 TBC1D17Q9HA65 648 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 TMLHEQ9NVH6 421 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 DMAC2Q9NW81 257 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 EHD2Q9NZN4 543 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 ZMYM5Q9UJ78 669 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 SIT1Q9Y3P8 196 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 KCNMB2Q9Y691 235 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 NCOR1O75376 2440 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 ATP8B3O60423 1300 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MYBPHLA2RUH7 354 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 CETN3O15182 167 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 NCAM2O15394 837 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 C4BPAP04003 597 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 EPB41P11171 864 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 PTPN1P18031 435 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 ATF6P18850 670 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 AOC1P19801 751 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 CYP2F1P24903 491 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 DDX6P26196 483 aaKnown RBP eCLIP6.81□□□□□ -1.32
TCF4-249ENST00000625716 GDI1P31150 447 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 AVPR1AP37288 418 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 PPP1R2P41236 205 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 VIPR2P41587 438 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 PIK3CAP42336 1068 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 PSMC1P62191 440 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 DLG4P78352 724 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 NRG1Q02297 640 aaPredicted RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 PRKCQQ04759 706 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 GRM2Q14416 872 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MLF2Q15773 248 aaPredicted RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 OCLNQ16625 522 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 NFIL3Q16649 462 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 DDR2Q16832 855 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 EDRF1Q3B7T1 1238 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 CFAP221Q4G0U5 840 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MDH1BQ5I0G3 518 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 SDHAF4Q5VUM1 108 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 TDRD10Q5VZ19 366 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 FAM171BQ6P995 826 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 VSTM1Q6UX27 236 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 GAREM2Q75VX8 874 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 TREML1Q86YW5 311 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 TMC8Q8IU68 726 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 ARID3BQ8IVW6 561 aaPredicted RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 MFSD6LQ8IWD5 586 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 SMYD4Q8IYR2 804 aaPredicted RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 TMEM105Q8N8V8 129 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 ENGASEQ8NFI3 743 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MYCBPAPQ8TBZ2 947 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 CSGALNACT1Q8TDX6 532 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 KBTBD7Q8WVZ9 684 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MRPS31Q92665 395 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 ATOH1Q92858 354 aaPredicted RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 DNASE1L2Q92874 299 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MYLPFQ96A32 169 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 ZSWIM3Q96MP5 696 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 NELL2Q99435 816 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 MRPL45Q9BRJ2 306 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 MED10Q9BTT4 135 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 LRRC3Q9BY71 257 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 PLA2G2FQ9BZM2 168 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 SAP130Q9H0E3 1048 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 TASP1Q9H6P5 420 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 TRPV4Q9HBA0 871 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 ZNF334Q9HCZ1 680 aaPredicted RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 THG1LQ9NWX6 298 aaKnown RBP6.81□□□□□ -1.32
TCF4-249ENST00000625716 CHMP5Q9NZZ3 219 aa6.81□□□□□ -1.32
TCF4-249ENST00000625716 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms