RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 TM4SF4P48230 202 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 ANXA11P50995 505 aaKnown RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 HABP2Q14520 560 aaPredicted RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PLS1Q14651 629 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PTPAQ15257 358 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 LRRC41Q15345 812 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PKN2Q16513 984 aaKnown RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 GEN1Q17RS7 908 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 LAIR1Q6GTX8 287 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 GADL1Q6ZQY3 521 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 OVCH2Q7RTZ1 564 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 ANKRD13AQ8IZ07 590 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 KIAA0319LQ8IZA0 1049 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 MAGEB6Q8N7X4 407 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 FAM98AQ8NCA5 519 aaKnown RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PDPRQ8NCN5 879 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 CELF1Q92879 486 aaKnown RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 RBM17Q96I25 401 aaKnown RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 CEP89Q96ST8 783 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 CGRRF1Q99675 332 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 NYXQ9GZU5 481 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PRO3102Q9H379 93 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 MAN1C1Q9NR34 630 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 LMBRD1Q9NUN5 540 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 FOXJ2Q9P0K8 574 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PACSIN3Q9UKS6 424 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 STXBP5LQ9Y2K9 1186 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 REXO2Q9Y3B8 237 aaKnown RBP3.86□□□□□ -1.79
CDKL5-208ENST00000624953 PCDHA3Q9Y5H8 950 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 MAST2Q6P0Q8 1798 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 DOCK2Q92608 1830 aa3.86□□□□□ -1.79
CDKL5-208ENST00000624953 A0A087X1B8 175 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 CCDC195A0A1B0GUA6 201 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 UNC119BA6NIH7 251 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 TSPAN6O43657 245 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 ECE2O60344 883 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 OFD1O75665 1012 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 DNAJB5O75953 348 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 ESRRBO95718 433 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 LMNAP02545 664 aaKnown RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 FTLP02792 175 aaPredicted RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 GJB1P08034 283 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 EIF4A1P60842 406 aaKnown RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 GPSM2P81274 684 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 MC2RQ01718 297 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 GRAPQ13588 217 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 DYRK1AQ13627 763 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 HLXQ14774 488 aaPredicted RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 TNIP1Q15025 636 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 CC2D1BQ5T0F9 858 aaKnown RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 HECTD2Q5U5R9 776 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 DENND1CQ8IV53 801 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 GRAPLQ8TC17 118 aaPredicted RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 CDK5RAP3Q96JB5 506 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 PDLIM2Q96JY6 352 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 FAM193BQ96PV7 902 aaPredicted RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 MAP3K14Q99558 947 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 MXD3Q9BW11 206 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 TMEM60Q9H2L4 133 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 ATP6V0A4Q9HBG4 840 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 KMT5AQ9NQR1 393 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 MRPS18AQ9NVS2 196 aaKnown RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 KCTD5Q9NXV2 234 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 CFAP97Q9P2B7 532 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 MED16Q9Y2X0 877 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 RRP7AQ9Y3A4 280 aaKnown RBP3.85□□□□□ -1.79
CDKL5-208ENST00000624953 KNSTRNQ9Y448 316 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 NR2E3Q9Y5X4 410 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 AOX1Q06278 1338 aa3.85□□□□□ -1.79
CDKL5-208ENST00000624953 A6NNZ2 444 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 H0YGN5 161 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 UBXN7O94888 489 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 HRGP04196 525 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 HKR1P10072 659 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 GATA3P23771 443 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 RPS12P25398 132 aaKnown RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 CLK3P49761 638 aaKnown RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 RAB1AP62820 205 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 BOP1Q14137 746 aaKnown RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 GALEQ14376 348 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 SWSAP1Q6NVH7 229 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 VWA1Q6PCB0 445 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 CHST15Q7LFX5 561 aaPredicted RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 ADGRG5Q8IZF4 528 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 SUPT20HQ8NEM7 779 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 KLHDC4Q8TBB5 520 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 TBC1D16Q8TBP0 767 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 CD99L2Q8TCZ2 262 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 SLC9A6Q92581 669 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 DCPSQ96C86 337 aaKnown RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 OSBPL9Q96SU4 736 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 BRD9Q9H8M2 597 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 GNL3LQ9NVN8 582 aaKnown RBP3.84□□□□□ -1.79
CDKL5-208ENST00000624953 PNPOQ9NVS9 261 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 ABCF2Q9UG63 623 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 HDAC9Q9UKV0 1011 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 TRIM17Q9Y577 477 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 PCDHAC2Q9Y5I4 1007 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms