RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 ATXN3LQ9H3M9 355 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 SYNCQ9H7C4 482 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 GDE1Q9NZC3 331 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 FAM50BQ9Y247 325 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 MRPS23Q9Y3D9 190 aaKnown RBP13.09□□□□□ -0.31
LINC00963-216ENST00000623185 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-216ENST00000623185 EPN1Q9Y6I3 576 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-216ENST00000623185 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-216ENST00000623185 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
LINC00963-216ENST00000623185 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 E7ENQ6 273 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 MYBL1P10243 752 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 RALAP11233 206 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-216ENST00000623185 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-216ENST00000623185 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-216ENST00000623185 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
LINC00963-216ENST00000623185 SLC5A9Q2M3M2 681 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 ARHGAP15Q53QZ3 475 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 CCDC122Q5T0U0 273 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 BSPRYQ5W0U4 402 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 OR6B2Q6IFH4 312 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 MMS22LQ6ZRQ5 1243 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 BHLHA9Q7RTU4 235 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 XYLT1Q86Y38 959 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 TMEM139Q8IV31 216 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
LINC00963-216ENST00000623185 KHSRPQ92945 711 aaKnown RBP eCLIP13.08□□□□□ -0.322e-13■■■■■ 28.4
LINC00963-216ENST00000623185 MCRS1Q96EZ8 462 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
LINC00963-216ENST00000623185 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 TAS2R14Q9NYV8 317 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 GMIPQ9P107 970 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 USTQ9Y2C2 406 aa13.08□□□□□ -0.32
LINC00963-216ENST00000623185 ANKRD62A6NC57 917 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 SIGLEC16A6NMB1 481 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 TMCO5BA8MYB1 307 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 EIF3CLB5ME19 914 aaKnown RBP13.07□□□□□ -0.32
LINC00963-216ENST00000623185 PIK3R2O00459 728 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 LTFP02788 710 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00963-216ENST00000623185 CLUL1Q15846 466 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 HECTD3Q5T447 861 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 BTBD8Q5XKL5 378 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 OLFML1Q6UWY5 402 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 TOGARAM2Q6ZUX3 1019 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 SLC26A9Q7LBE3 791 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 CCDC112Q8NEF3 446 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 ATXN2LQ8WWM7 1075 aaKnown RBP13.07□□□□□ -0.32
LINC00963-216ENST00000623185 NDRG1Q92597 394 aaKnown RBP13.07□□□□□ -0.32
LINC00963-216ENST00000623185 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 PPP1R9BQ96SB3 815 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 EIF3CQ99613 913 aaKnown RBP13.07□□□□□ -0.32
LINC00963-216ENST00000623185 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 POMKQ9H5K3 350 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 POPDC2Q9HBU9 364 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00963-216ENST00000623185 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 CDH7Q9ULB5 785 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 INTUQ9ULD6 942 aa13.07□□□□□ -0.32
LINC00963-216ENST00000623185 PTPRDP23468 1912 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 TCRBV5S1A1TA0A578 114 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 HSF2BPO75031 334 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 TADA3O75528 432 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 NDUFA10O95299 355 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 ABL1P00519 1130 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 OAS1P00973 400 aaKnown RBP13.06□□□□□ -0.32
LINC00963-216ENST00000623185 FYNP06241 537 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 RARGP13631 454 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 HDCP19113 662 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 ATP5C1P36542 298 aaKnown RBP13.06□□□□□ -0.32
LINC00963-216ENST00000623185 PGFP49763 221 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 GPC5P78333 572 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 SPA17Q15506 151 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 TEAD2Q15562 447 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 TXNDC8Q6A555 127 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 PLEKHA7Q6IQ23 1121 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 PTCRAQ6ISU1 281 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-216ENST00000623185 FAM183BPQ6ZVS7 135 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 OTOP3Q7RTS5 596 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 C3orf20Q8ND61 904 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
LINC00963-216ENST00000623185 FGF13Q92913 245 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms