RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 YWHAQP27348 245 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 ZNF268Q14587 947 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 H2AFVQ71UI9 128 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 GRASPQ7Z6J2 395 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 XYLT1Q86Y38 959 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 DNAAF5Q86Y56 855 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 SCUBE3Q8IX30 993 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 ZNF512Q96ME7 567 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 ZNF830Q96NB3 372 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 COL25A1Q9BXS0 654 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 WDR6Q9NNW5 1121 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 LUC7LQ9NQ29 371 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 WDR35Q9P2L0 1181 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 INTUQ9ULD6 942 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 SCML2Q9UQR0 700 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 REXO2Q9Y3B8 237 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 DENND4AQ7Z401 1863 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 MUC3AQ02505 3323 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 PIK3R2O00459 728 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 SART1O43290 800 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 SP100P23497 879 aaPredicted RBP20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 SCNN1AP37088 669 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 MAGEA1P43355 309 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 GALCP54803 685 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 KRT83P78385 493 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 TAF12Q16514 161 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 C2CD6Q53TS8 623 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 CYP4A22Q5TCH4 519 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 IRGQQ8WZA9 623 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 MCRS1Q96EZ8 462 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 HCFC1R1Q9NWW0 138 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 UXTQ9UBK9 157 aaPredicted RBP20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 PCDHA13Q9Y5I0 950 aa20.83■□□□□ 0.93
PDLIM2-221ENST00000622702 USP17L7P0C7H9 530 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 DAOAP59103 153 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 OLFML1Q6UWY5 402 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 TOGARAM2Q6ZUX3 1019 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 FAM183BPQ6ZVS7 135 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 BHLHA9Q7RTU4 235 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 PACSIN1Q9BY11 444 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 LRRC3Q9BY71 257 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 AVENQ9NQS1 362 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 MAGED2Q9UNF1 606 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 ADGRG1Q9Y653 693 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 DOCK6Q96HP0 2047 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 BDP1A6H8Y1 2624 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 ZNF638Q14966 1978 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 CLUHO75153 1309 aa20.82■□□□□ 0.92
PDLIM2-221ENST00000622702 TCRBV5S1A1TA0A578 114 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 RRM1P23921 792 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 EPHA5P54756 1037 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 NTHL1P78549 312 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 SLC6A3Q01959 620 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 IFRD2Q12894 506 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 TAF10Q12962 218 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 OR6B2Q6IFH4 312 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 TMC8Q8IU68 726 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 LEMD2Q8NC56 503 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 C3orf20Q8ND61 904 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 ACRBPQ8NEB7 543 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 OVCA2Q8WZ82 227 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 FBXO32Q969P5 355 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 ZNF653Q96CK0 615 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 SLITRK1Q96PX8 696 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 DESI2Q9BSY9 194 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 THAP2Q9H0W7 228 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 ASNSD1Q9NWL6 643 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 DNMT3BQ9UBC3 853 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 C19orf67A6NJJ6 358 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 GLI1P08151 1106 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 TMEM253P0C7T8 217 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 PTPN2P17706 415 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 ABCB4P21439 1286 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 GPC5P78333 572 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 PLEKHA7Q6IQ23 1121 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 SLC26A9Q7LBE3 791 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 MON1AQ86VX9 555 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 GJD3Q8N144 294 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 PDZD8Q8NEN9 1154 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 CLEC4CQ8WTT0 213 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 CTNNBL1Q8WYA6 563 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 PIWIL1Q96J94 861 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 IL21Q9HBE4 155 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 ZNF334Q9HCZ1 680 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 CD320Q9NPF0 282 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 CNOT8Q9UFF9 292 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 NR2E1Q9Y466 385 aa20.81■□□□□ 0.92
PDLIM2-221ENST00000622702 TTC28Q96AY4 2481 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 LOC730098B7Z3J9 87 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 CYP1A2P05177 515 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 ZDHHC11BP0C7U3 371 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 PPP3CCP48454 512 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 VAV2P52735 878 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 PABPC1LQ4VXU2 614 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 EFHC1Q5JVL4 640 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 ARHGAP18Q8N392 663 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 NDRG1Q92597 394 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 CORO1BQ9BR76 489 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 ASAH2Q9NR71 780 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 PARVAQ9NVD7 372 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms