RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MDM4O15151 490 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 CALCAP01258 141 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 CYP4F8P98187 520 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 APBA1Q02410 837 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 E2F4Q16254 413 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ARMC6Q6NXE6 501 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ADCK2Q7Z695 626 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 AFAP1L2Q8N4X5 818 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ZNF557Q8N988 423 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 SLC20A1Q8WUM9 679 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 SNX27Q96L92 541 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 CNPY3Q9BT09 278 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 DNAJB4Q9UDY4 337 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 FBXL5Q9UKA1 691 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 AP4E1Q9UPM8 1137 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 GALTP07902 379 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 HPDP32754 393 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MTHFRP42898 656 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 PAPOLAP51003 745 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MXRA7P84157 204 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 NSUN2Q08J23 767 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TUBB2AQ13885 445 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 SHHQ15465 462 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 KRT71Q3SY84 523 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 C2orf27AQ580R0 203 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 C1orf54Q8WWF1 131 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 PBKQ96KB5 322 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TUBB2BQ9BVA1 445 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TKTL2Q9H0I9 626 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 STN1Q9H668 368 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ACP6Q9NPH0 428 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ARHGEF4Q9NR80 690 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 DERAQ9Y315 318 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 A0A1B0GTH6 734 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MYBPHLA2RUH7 354 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 INPPL1O15357 1258 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 STX7O15400 261 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 APRTP07741 180 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 RALBP11234 206 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 GEMIN4P57678 1058 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TUBB4BP68371 445 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MON1AQ86VX9 555 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ZNF280BQ86YH2 543 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 CDC26Q8NHZ8 85 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 SPATA18Q8TC71 538 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 IGSF21Q96ID5 467 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 PCYT2Q99447 389 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 FAM118BQ9BPY3 351 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TRMT61BQ9BVS5 477 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TM6SF2Q9BZW4 377 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 DUS2Q9NX74 493 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TBC1D14Q9P2M4 693 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 ASTN1O14525 1302 aa9.44□□□□□ -0.9
HDAC9-229ENST00000622668 SPTBN2O15020 2390 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 RFXAPO00287 272 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 TBL1XO60907 577 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 ATP2C2O75185 946 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 GJB5O95377 273 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 CHRNA1P02708 482 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 RBP3P10745 1247 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 SLC1A1P43005 524 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 SLMAPQ14BN4 828 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 RPS6KA2Q15349 733 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 SYTL3Q4VX76 610 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
HDAC9-229ENST00000622668 C4orf32Q8N8J7 132 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 ANKRD52Q8NB46 1076 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 CFAP61Q8NHU2 1237 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 KAT2BQ92831 832 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 HDAC11Q96DB2 347 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 PDLIM7Q9NR12 457 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 TELO2Q9Y4R8 837 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 ATP5DP30049 168 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 WDR5P61964 334 aaKnown RBP9.43□□□□□ -0.9
HDAC9-229ENST00000622668 ZNF284Q2VY69 593 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 HHATQ5VTY9 493 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 DNAJB7Q7Z6W7 309 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-229ENST00000622668 BLOC1S5Q8TDH9 187 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 PYROXD1Q8WU10 500 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 RAPGEF5Q92565 580 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 YIPF2Q9BWQ6 316 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 LATS2Q9NRM7 1088 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 RRN3Q9NYV6 651 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 HACD3Q9P035 362 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 GMIPQ9P107 970 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 SFMBT1Q9UHJ3 866 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 CRLS1Q9UJA2 301 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 L1RE1Q9UN81 338 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 CPQQ9Y646 472 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 LAMB4A4D0S4 1761 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 UBR2Q8IWV8 1755 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 F8VZ95 297 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms