RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CAPZA3Q96KX2 299 aa14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 SLC2A13Q96QE2 648 aa14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 NAP1L3Q99457 506 aaPredicted RBP14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 C11orf84Q9BUA3 381 aaPredicted RBP14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 CARD6Q9BX69 1037 aa14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 IL37Q9NZH6 218 aa14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 STAP1Q9ULZ2 295 aa14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 IRAK3Q9Y616 596 aa14.89□□□□□ -0.03
CLTCL1-212ENST00000622493 LCHNA4D1U4 455 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 CTAGE15A4D2H0 777 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 RTN3O95197 1032 aaPredicted RBP14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 VNN2O95498 520 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 LTFP02788 710 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 RB1P06400 928 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 CTAGE8P0CG41 777 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 RPL17P18621 184 aaKnown RBP14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 CTNNB1P35222 781 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 TAS2R40P59535 323 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 SHHQ15465 462 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 DDR2Q16832 855 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 SLC25A52Q3SY17 297 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 DCAF12L1Q5VU92 463 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 DENND5BQ6ZUT9 1274 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 STRADAQ7RTN6 431 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 CTAGE6Q86UF2 777 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 CTAGE4Q8IX94 777 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 KATNAL2Q8IYT4 538 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 DEFB106AQ8N104 65 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 ARFGAP1Q8N6T3 406 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 SCAMP5Q8TAC9 235 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 NT5C3BQ969T7 300 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 SAMD11Q96NU1 681 aa14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 SEPT5Q99719 369 aaPredicted RBP14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 DDX56Q9NY93 547 aaKnown RBP14.88□□□□□ -0.03
CLTCL1-212ENST00000622493 FAM92AA1XBS5 289 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 YJEFN3A6XGL0 299 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 E7ENQ6 273 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 PGRMC1O00264 195 aaKnown RBP14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 CAPN9O14815 690 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 SLC25A11Q02978 314 aaKnown RBP14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 DCAF6Q58WW2 860 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 SEL1L2Q5TEA6 688 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 BHLHA9Q7RTU4 235 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 ARHGAP18Q8N392 663 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 EXD1Q8NHP7 514 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 FAM172AQ8WUF8 416 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 NDRG1Q92597 394 aaKnown RBP14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 CRISPLD1Q9H336 500 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 EHD2Q9NZN4 543 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 SCML2Q9UQR0 700 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 SLC27A5Q9Y2P5 690 aa14.87□□□□□ -0.03
CLTCL1-212ENST00000622493 EFCAB8A8MWE9 144 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 ENDOD1O94919 500 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 ZRANB2O95218 330 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 DNAJB2P25686 324 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 MIPP30301 263 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 CETN2P41208 172 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 ATP11AP98196 1134 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 C15orf59Q2T9L4 293 aaPredicted RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 BOLA3Q53S33 107 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 TMC7Q7Z402 723 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 BNIPLQ7Z465 357 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 MON1AQ86VX9 555 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 RCOR2Q8IZ40 523 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 TNS4Q8IZW8 715 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 TTC9BQ8N6N2 239 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 TBCBQ99426 244 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 NPY6RQ99463 290 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 ABCC13Q9NSE7 274 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 TMEM51Q9NW97 253 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 USP18Q9UMW8 372 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 PCDHA11Q9Y5I1 949 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 PDE2AO00408 941 aaPredicted RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 CTIFO43310 598 aaKnown RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 PRPSAP2O60256 369 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 FYNP06241 537 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 PYGMP11217 842 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 NCAM1P13591 858 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 YWHAQP27348 245 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 GPR15P49685 360 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 COPS2P61201 443 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 CDO1Q16878 200 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 ODF2Q5BJF6 829 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 BSPRYQ5W0U4 402 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 HFE2Q6ZVN8 426 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 ANKRD7Q92527 254 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 PGAP3Q96FM1 320 aaPredicted RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 MS4A14Q96JA4 679 aa14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 NGRNQ9NPE2 291 aaKnown RBP14.86□□□□□ -0.03
CLTCL1-212ENST00000622493 COL4A4P53420 1690 aaPredicted RBP14.85□□□□□ -0.03
CLTCL1-212ENST00000622493 PLXNA4Q9HCM2 1894 aa14.85□□□□□ -0.03
CLTCL1-212ENST00000622493 TEX28O15482 410 aa14.85□□□□□ -0.03
CLTCL1-212ENST00000622493 CXCL14O95715 111 aa14.85□□□□□ -0.03
CLTCL1-212ENST00000622493 F9P00740 461 aa14.85□□□□□ -0.03
CLTCL1-212ENST00000622493 ADH1AP07327 375 aa14.85□□□□□ -0.03
CLTCL1-212ENST00000622493 TCF4P15884 667 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms