RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ZMYND8Q9ULU4 1186 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 FMN2Q9NZ56 1722 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 A0A0G2JLL6 359 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 MAP3K13O43283 966 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 PCDH8O95206 1070 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 DARSP14868 501 aaKnown RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 HDCP19113 662 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 OR1D2P34982 312 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 KPNA1P52294 538 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 PPP2R2AP63151 447 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 HIBCHQ6NVY1 386 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 ILDR2Q71H61 639 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 PRRT2Q7Z6L0 340 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 SPATS2Q86XZ4 545 aaKnown RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 SH2D3CQ8N5H7 860 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 EFHD1Q9BUP0 239 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 YIPF2Q9BWQ6 316 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 COG4Q9H9E3 785 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 MARCOQ9UEW3 520 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 ADAM21Q9UKJ8 722 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 VANGL2Q9ULK5 521 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 CLCA2Q9UQC9 943 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 C2orf81A6NN90 581 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 ANKRD65E5RJM6 399 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 KPNA3O00505 521 aaPredicted RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 PSTPIP1O43586 416 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 MYO1DO94832 1006 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 CCL14Q16627 93 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 TRIM68Q6AZZ1 485 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 PIGZQ86VD9 579 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 LGI2Q8N0V4 545 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 TMEM86AQ8N2M4 240 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 SERPINB11Q96P15 392 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 XAB2Q9HCS7 855 aaKnown RBP9.57□□□□□ -0.88
GGA3-223ENST00000621870 PKD2L2Q9NZM6 624 aa9.57□□□□□ -0.88
GGA3-223ENST00000621870 TBC1D3BA6NDS4 549 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 DDX3XO00571 662 aaKnown RBP eCLIP9.56□□□□□ -0.881e-12■■□□□ 12.3
GGA3-223ENST00000621870 AP5Z1O43299 807 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 DDHD2O94830 711 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 RHOBTB1O94844 696 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 AMPD1P23109 780 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 GEMP55040 296 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ZNF268Q14587 947 aaPredicted RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 RBBP7Q16576 425 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ECM1Q16610 540 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 PABPC1LQ4VXU2 614 aaKnown RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 C6orf10Q5SRN2 563 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 LCA5Q86VQ0 697 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 USP13Q92995 863 aaPredicted RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 MTMR8Q96EF0 704 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 TGS1Q96RS0 853 aaKnown RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 THG1LQ9NWX6 298 aaKnown RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 FBXL21Q9UKT6 434 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 FOXP2O15409 715 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ZNF862O60290 1169 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 PAEPP09466 180 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 SMPD1P17405 629 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 CENPCQ03188 943 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 PTK7Q13308 1070 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 LINC00523Q86TU6 105 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 PPIL6Q8IXY8 311 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 DBF4BQ8NFT6 615 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 TSPAN17Q96FV3 270 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 PPP1R2P1Q96PQ5 205 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 UPF3AQ9H1J1 476 aaKnown RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 OSGEPL1Q9H4B0 414 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 CERS4Q9HA82 394 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 CD274Q9NZQ7 290 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 GPR25O00155 361 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 RTN3O95197 1032 aaPredicted RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 SERPINF2P08697 491 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 SPATA31D3P0C874 917 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 CYP2F1P24903 491 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ATP5C1P36542 298 aaKnown RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 ARFIP2P53365 341 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 MAPK7Q13164 816 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ZNF284Q2VY69 593 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 SGO1Q5FBB7 561 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ZBTB41Q5SVQ8 909 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 SPATA31D4Q6ZUB0 917 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 LRRC6Q86X45 466 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 HERC6Q8IVU3 1022 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 TRIM48Q8IWZ4 208 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 KCTD10Q9H3F6 313 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 SENP1Q9P0U3 644 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 VAV3Q9UKW4 847 aa9.56□□□□□ -0.88
GGA3-223ENST00000621870 VIRMAQ69YN4 1812 aaKnown RBP9.56□□□□□ -0.88
GGA3-223ENST00000621870 ATRNO75882 1429 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 SMIM35A0A1B0GVV1 85 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 TTC36A6NLP5 189 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 KLRC4O43908 158 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 CXCL14O95715 111 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ADH1AP07327 375 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 HSPA8P11142 646 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms