RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SULT1E1P49888 294 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 CDH6P55285 790 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 HDAC4P56524 1084 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 YWHAZP63104 245 aaKnown RBP22.42■■□□□ 1.18
SPAST-204ENST00000621856 DYNLT1P63172 113 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 KRT17Q04695 432 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 C4orf50Q6ZRC1 276 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 TEKT4Q8WW24 435 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 TBCBQ99426 244 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 C11orf49Q9H6J7 331 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 CNGB3Q9NQW8 809 aa22.42■■□□□ 1.18
SPAST-204ENST00000621856 NLRC5Q86WI3 1866 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 HHLA1C9JL84 531 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 SYN3O14994 580 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 GAS8O95995 478 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 CLTBP09497 229 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 SLC11A1P49279 550 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 DAOAP59103 153 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 C1QTNF8P60827 252 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 TAZQ16635 292 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 RAB41Q5JT25 222 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 SYDE1Q6ZW31 735 aaPredicted RBP22.41■■□□□ 1.18
SPAST-204ENST00000621856 CENPIQ92674 756 aaPredicted RBP22.41■■□□□ 1.18
SPAST-204ENST00000621856 HAUS1Q96CS2 278 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 C11orf84Q9BUA3 381 aaPredicted RBP22.41■■□□□ 1.18
SPAST-204ENST00000621856 GPATCH2LQ9NWQ4 482 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 PTPRDP23468 1912 aa22.41■■□□□ 1.18
SPAST-204ENST00000621856 FNDC1Q4ZHG4 1894 aaPredicted RBP22.41■■□□□ 1.18
SPAST-204ENST00000621856 RRP9O43818 475 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 CST8O60676 142 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 OAZ2O95190 189 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 ECHS1P30084 290 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 DRG2P55039 364 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 IKBKEQ14164 716 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 PKN2Q16513 984 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 DCAF6Q58WW2 860 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 CNKSR3Q6P9H4 555 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 STRADAQ7RTN6 431 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 CEP57Q86XR8 500 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 MAP7D3Q8IWC1 876 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 DCP1BQ8IZD4 617 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 CRIPAKQ8N1N5 446 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 PAWRQ96IZ0 340 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 SNRNP25Q9BV90 132 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 MAK16Q9BXY0 300 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 NEUROG2Q9H2A3 272 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 VIPAS39Q9H9C1 493 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 FAM53CQ9NYF3 392 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 HCSTQ9UBK5 93 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 LIASO43766 372 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 UPP2O95045 317 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 OR4Q2P0C623 313 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 USP17L7P0C7H9 530 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 NOS2P35228 1153 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 PDK2Q15119 407 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 SLC25A52Q3SY17 297 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 SLC39A12Q504Y0 691 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 VARS2Q5ST30 1063 aaKnown RBP22.4■■□□□ 1.18
SPAST-204ENST00000621856 FAM171A1Q5VUB5 890 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.4■■□□□ 1.18
SPAST-204ENST00000621856 BBS12Q6ZW61 710 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 KRT222Q8N1A0 295 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 DNAJC5GQ8N7S2 189 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 SLC2A13Q96QE2 648 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 TMEM175Q9BSA9 504 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 ZCWPW1Q9H0M4 648 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 POPDC2Q9HBU9 364 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 STAP1Q9ULZ2 295 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 HPCAL4Q9UM19 191 aa22.4■■□□□ 1.18
SPAST-204ENST00000621856 ZBED1O96006 694 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 GBP1P32455 592 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 RPL21P46778 160 aaKnown RBP22.39■■□□□ 1.17
SPAST-204ENST00000621856 ATXN1P54253 815 aaKnown RBP22.39■■□□□ 1.17
SPAST-204ENST00000621856 LMNB2Q03252 620 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 MMRN1Q13201 1228 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 GPS2Q13227 327 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 ZC3H12AQ5D1E8 599 aaKnown RBP22.39■■□□□ 1.17
SPAST-204ENST00000621856 HFE2Q6ZVN8 426 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 GSTA5Q7RTV2 222 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 LRRC43Q8N309 656 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 TTC13Q8NBP0 860 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 MARCH5Q9NX47 278 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 ASIC3Q9UHC3 531 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 DNPEPQ9ULA0 475 aa22.39■■□□□ 1.17
SPAST-204ENST00000621856 SF3B1O75533 1304 aaKnown RBP eCLIP22.38■■□□□ 1.173e-9■■■■■ 206.8
SPAST-204ENST00000621856 VWA8A3KMH1 1905 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 CAPN9O14815 690 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 MDM4O15151 490 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 RFC2P35250 354 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 ARSEP51690 589 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 LBX1P52954 281 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 PTK6Q13882 451 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 BYSLQ13895 437 aaKnown RBP22.38■■□□□ 1.17
SPAST-204ENST00000621856 DPYSL3Q14195 570 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 LRRC26Q2I0M4 334 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 CTXN3Q4LDR2 81 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 ERMARDQ5T6L9 678 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 ZNF365Q70YC5 407 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 ADAM33Q9BZ11 813 aa22.38■■□□□ 1.17
SPAST-204ENST00000621856 ZNF148Q9UQR1 794 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms