RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 STX10O60499 249 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 APODP05090 189 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 EPB41P11171 864 aaKnown RBP25.37■■□□□ 1.65
ATXN3-253ENST00000621269 EIF2DP41214 584 aaKnown RBP25.37■■□□□ 1.65
ATXN3-253ENST00000621269 SLC6A11P48066 632 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 CLEC20AQ6ZU45 233 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 TSTD1Q8NFU3 115 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 NETO1Q8TDF5 533 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 JAKMIP2Q96AA8 810 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 ARRDC1-AS1Q9H2J1 176 aa25.37■■□□□ 1.65
ATXN3-253ENST00000621269 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.36■■□□□ 1.65
ATXN3-253ENST00000621269 MED19A0JLT2 244 aaPredicted RBP25.36■■□□□ 1.65
ATXN3-253ENST00000621269 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.36■■□□□ 1.65
ATXN3-253ENST00000621269 TLR5O60602 858 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 CILPO75339 1184 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 KAT7O95251 611 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 IRF1P10914 325 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 MRPS21P82921 87 aaKnown RBP25.36■■□□□ 1.65
ATXN3-253ENST00000621269 GAD2Q05329 585 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 LY6G5CQ5SRR4 150 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 BTBD8Q5XKL5 378 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 FMR1NBQ8N0W7 255 aaPredicted RBP25.36■■□□□ 1.65
ATXN3-253ENST00000621269 EEF2KMTQ96G04 330 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 SCML2Q9UQR0 700 aa25.36■■□□□ 1.65
ATXN3-253ENST00000621269 ACO1P21399 889 aaKnown RBP25.35■■□□□ 1.65
ATXN3-253ENST00000621269 DGKEP52429 567 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 TTC39CQ8N584 583 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 CCDC33Q8N5R6 958 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 FBXL13Q8NEE6 735 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 ZC3H10Q96K80 434 aaKnown RBP25.35■■□□□ 1.65
ATXN3-253ENST00000621269 TSG101Q99816 390 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 PNPLA8Q9NP80 782 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 ARHGEF4Q9NR80 690 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 MMP17Q9ULZ9 603 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 PCDHA5Q9Y5H7 936 aa25.35■■□□□ 1.65
ATXN3-253ENST00000621269 EPN2O95208 641 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 SMC2O95347 1197 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 ATP5C1P36542 298 aaKnown RBP25.34■■□□□ 1.65
ATXN3-253ENST00000621269 GRIA2P42262 883 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 PRCPP42785 496 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 PGFP49763 221 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 MXI1P50539 228 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 MCCD1P59942 119 aaPredicted RBP25.34■■□□□ 1.65
ATXN3-253ENST00000621269 NUCB2P80303 420 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 GOLGA8FQ08AF8 430 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 GOLGA8DPQ0D2H9 430 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 ZNF658Q5TYW1 1059 aaPredicted RBP25.34■■□□□ 1.65
ATXN3-253ENST00000621269 GPRIN1Q7Z2K8 1008 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 C12orf40Q86WS4 652 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 BBS7Q8IWZ6 715 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 WHAMMQ8TF30 809 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 FAXDC2Q96IV6 333 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 HEXIM2Q96MH2 286 aaKnown RBP25.34■■□□□ 1.65
ATXN3-253ENST00000621269 GSDMAQ96QA5 445 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 DUSP9Q99956 384 aaKnown RBP25.34■■□□□ 1.65
ATXN3-253ENST00000621269 RAB20Q9NX57 234 aa25.34■■□□□ 1.65
ATXN3-253ENST00000621269 HHLA1C9JL84 531 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 CYP26A1O43174 497 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 RHOBTB1O94844 696 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 KDSRQ06136 332 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 ELF2Q15723 593 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 PREPLQ4J6C6 727 aaPredicted RBP25.33■■□□□ 1.65
ATXN3-253ENST00000621269 ZNF394Q53GI3 561 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 C12orf50Q8NA57 414 aaPredicted RBP25.33■■□□□ 1.65
ATXN3-253ENST00000621269 SEMA4DQ92854 862 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 CYLDQ9NQC7 956 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 SPHK2Q9NRA0 654 aa25.33■■□□□ 1.65
ATXN3-253ENST00000621269 HOOK1Q9UJC3 728 aaKnown RBP25.33■■□□□ 1.65
ATXN3-253ENST00000621269 A0A0A0MRY4 1105 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 DCDC2BA2VCK2 349 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 TBX18O95935 607 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 TIE1P35590 1138 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 TNFRSF4P43489 277 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 CCDC6Q16204 474 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 CRY1Q16526 586 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 ANO4Q32M45 955 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 PLK5Q496M5 336 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 AASDHQ4L235 1098 aaPredicted RBP25.32■■□□□ 1.64
ATXN3-253ENST00000621269 USP39Q53GS9 565 aaKnown RBP25.32■■□□□ 1.64
ATXN3-253ENST00000621269 TCERG1LQ5VWI1 586 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 ALLCQ8N6M5 410 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 NAT16Q8N8M0 369 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 KLF16Q9BXK1 252 aaPredicted RBP25.32■■□□□ 1.64
ATXN3-253ENST00000621269 DUSP16Q9BY84 665 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 GTPBP4Q9BZE4 634 aaKnown RBP25.32■■□□□ 1.64
ATXN3-253ENST00000621269 LSM7Q9UK45 103 aaKnown RBP25.32■■□□□ 1.64
ATXN3-253ENST00000621269 PCDHGA5Q9Y5G8 931 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 DNAH14Q0VDD8 3507 aa25.32■■□□□ 1.64
ATXN3-253ENST00000621269 ANTXRLA6NF34 631 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 SLC30A4O14863 429 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 DCLK1O15075 740 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 HOXC11O43248 304 aaPredicted RBP25.31■■□□□ 1.64
ATXN3-253ENST00000621269 ALDH1A2O94788 518 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 KLF8O95600 359 aaPredicted RBP25.31■■□□□ 1.64
ATXN3-253ENST00000621269 ZNF806P0C7X5 589 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 MESP2Q0VG99 397 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 HSF5Q4G112 596 aaPredicted RBP25.31■■□□□ 1.64
ATXN3-253ENST00000621269 COBLL1Q53SF7 1204 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 DCAF17Q5H9S7 520 aaPredicted RBP25.31■■□□□ 1.64
ATXN3-253ENST00000621269 PPP1R26Q5T8A7 1209 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms