RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MROH2AA6NES4 1674 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 CLTCQ00610 1675 aaKnown RBP6.15□□□□□ -1.42
VPS29-212ENST00000621131 PPP6CO00743 305 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 TP73O15350 636 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 TUSC2O75896 110 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 CYP2D6P10635 497 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 KITP10721 976 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 CTGFP29279 349 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 EPHB2P29323 1055 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 GPSM2P81274 684 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 SATB1Q01826 763 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 LY6KQ17RY6 165 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 ANO6Q4KMQ2 910 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 DEPDC1Q5TB30 811 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 LMBRD2Q68DH5 695 aaPredicted RBP6.15□□□□□ -1.42
VPS29-212ENST00000621131 YTHDF3Q7Z739 585 aaKnown RBP6.15□□□□□ -1.42
VPS29-212ENST00000621131 CYP2W1Q8TAV3 490 aa6.15□□□□□ -1.42
VPS29-212ENST00000621131 NAF1Q96HR8 494 aaKnown RBP6.15□□□□□ -1.42
VPS29-212ENST00000621131 LENG8Q96PV6 779 aaPredicted RBP6.15□□□□□ -1.42
VPS29-212ENST00000621131 SPATA31E1Q6ZUB1 1445 aa6.15□□□□□ -1.43
VPS29-212ENST00000621131 ADGRB3O60242 1522 aa6.15□□□□□ -1.43
VPS29-212ENST00000621131 A0A1W2PPL8 197 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 TUBB4AP04350 444 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 DDX10Q13206 875 aaKnown RBP6.14□□□□□ -1.43
VPS29-212ENST00000621131 MGAT5BQ3V5L5 792 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 EPHA10Q5JZY3 1008 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 MTHFD1LQ6UB35 978 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 NPNTQ6UXI9 565 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 ZNF783Q6ZMS7 281 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 TRIM72Q6ZMU5 477 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 CATSPERGQ6ZRH7 1159 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 OVCH2Q7RTZ1 564 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 IZUMO1Q8IYV9 350 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 ABHD11Q8NFV4 315 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 OR6B3Q8NGW1 331 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 OSCP1Q8WVF1 389 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 SH2D3AQ9BRG2 576 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 PIK3C2BO00750 1634 aa6.14□□□□□ -1.43
VPS29-212ENST00000621131 PPLO60437 1756 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 PDE8BO95263 885 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 DLDP09622 509 aaKnown RBP6.13□□□□□ -1.43
VPS29-212ENST00000621131 EPHB1P54762 984 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 TPTEP56180 551 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 KRT17Q04695 432 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 SUPT20HL1Q3ZLR7 823 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 PLA1AQ53H76 456 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 SLC18B1Q6NT16 456 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
VPS29-212ENST00000621131 C8orf58Q8NAV2 365 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 ZBTB34Q8NCN2 500 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 IL31RAQ8NI17 732 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 PPP2R3CQ969Q6 453 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 MS4A7Q9GZW8 240 aaPredicted RBP6.13□□□□□ -1.43
VPS29-212ENST00000621131 BHMT2Q9H2M3 363 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 ZIM2Q9NZV7 527 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 CCNL1Q9UK58 526 aaPredicted RBP6.13□□□□□ -1.43
VPS29-212ENST00000621131 SNX14Q9Y5W7 946 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 GPRASP1Q5JY77 1395 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 CCDC7Q96M83 1385 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 NOS1P29475 1434 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 MYO3AQ8NEV4 1616 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 IQGAP1P46940 1657 aa6.13□□□□□ -1.43
VPS29-212ENST00000621131 TMEM233B4DJY2 109 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 H7C1Q1 480 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 SYNMO15061 1565 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 PHGDHO43175 533 aaKnown RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 PRKCBP05771 671 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 MYBP10242 640 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 EN2P19622 333 aaPredicted RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 SFPQP23246 707 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS29-212ENST00000621131 CYP1B1Q16678 543 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 PTCHD3Q3KNS1 767 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 MORN5Q5VZ52 161 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 FCRL6Q6DN72 434 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 CAND1Q86VP6 1230 aaKnown RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 PNLDC1Q8NA58 520 aaKnown RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 BPIFB1Q8TDL5 484 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 RUNDC1Q96C34 613 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 DAZAP1Q96EP5 407 aaKnown RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 RITA1Q96K30 269 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 ASB2Q96Q27 587 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 TRMT13Q9NUP7 481 aaKnown RBP6.12□□□□□ -1.43
VPS29-212ENST00000621131 SLC52A1Q9NWF4 448 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 UGGT1Q9NYU2 1555 aa6.12□□□□□ -1.43
VPS29-212ENST00000621131 CEP170BQ9Y4F5 1589 aaPredicted RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 SETBP1Q9Y6X0 1596 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 CEP350Q5VT06 3117 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 ERVK-7P63135 1459 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 SCAF11Q99590 1463 aaKnown RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 TBC1D4O60343 1298 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 CTNND1O60716 968 aaKnown RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 VNN1O95497 513 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 SLC13A2Q13183 592 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 KLF9Q13886 244 aaPredicted RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 L1TD1Q5T7N2 865 aaKnown RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 MAEAQ7L5Y9 396 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 TERB1Q8NA31 727 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms