RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 AP2B1P63010 937 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 C6orf163Q5TEZ5 329 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 AZIN2Q96A70 460 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 FAF2Q96CS3 445 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 CALN1Q9BXU9 219 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 C20orf27Q9GZN8 174 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 POPDC2Q9HBU9 364 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 MKS1Q9NXB0 559 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 MARCOQ9UEW3 520 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 PPM1HQ9ULR3 514 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 KITP10721 976 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 ASPAP45381 313 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 MMRN1Q13201 1228 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 XYLT1Q86Y38 959 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 ZNF526Q8TF50 670 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 TUBGCP5Q96RT8 1024 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 CPXM1Q96SM3 734 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 TMEM134Q9H6X4 195 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 SMYD2Q9NRG4 433 aa20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 ZBTB12Q9Y330 459 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 HBS1LQ9Y450 684 aaKnown RBP20.36■□□□□ 0.85
PDLIM3-212ENST00000620787 PRR5-ARHGAP8B1AHC4 643 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 SNNO75324 88 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 USP1O94782 785 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 TRUB2O95900 331 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 ZCCHC18P0CG32 403 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 ARHGAP8P85298 464 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 CDC16Q13042 620 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 GRM1Q13255 1194 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 C1orf146Q5VVC0 180 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 KYAT3Q6YP21 454 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 TTC1Q99614 292 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 LHX5Q9H2C1 402 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 RSAD1Q9HA92 442 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 VWA5AO00534 786 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 BUD23O43709 281 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 PRKCHP24723 683 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 ALDH18A1P54886 795 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 BMPR2Q13873 1038 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 TBCCQ15814 346 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 TMCO4Q5TGY1 634 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 WDR78Q5VTH9 848 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 NUDCD3Q8IVD9 361 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 ATG4CQ96DT6 458 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 PEBP4Q96S96 227 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 SLC13A1Q9BZW2 595 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 C1orf21Q9H246 121 aa20.35■□□□□ 0.85
PDLIM3-212ENST00000620787 UGT1A9O60656 530 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 OATP04181 439 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 ERBB2P04626 1255 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 HIRAP54198 1017 aaPredicted RBP20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 ZBTB33Q86T24 672 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 SESTD1Q86VW0 696 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 AKT1S1Q96B36 256 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 MTBPQ96DY7 904 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 RPAP3Q9H6T3 665 aaPredicted RBP20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 UGT1A7Q9HAW7 530 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 UGT1A10Q9HAW8 530 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 UGT1A8Q9HAW9 530 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 RAB6BQ9NRW1 208 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 ZC3H7BQ9UGR2 993 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 USP18Q9UMW8 372 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 ANK1P16157 1881 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 SERPINA6P08185 405 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 CD19P15391 556 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 CPOXP36551 454 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 RPS6KA3P51812 740 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 CAPSQ13938 189 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 CRLF3Q8IUI8 442 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 SLC25A41Q8N5S1 370 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 SHKBP1Q8TBC3 707 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 RAB3IL1Q8TBN0 382 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 NSUN6Q8TEA1 469 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 USP29Q9HBJ7 922 aa20.34■□□□□ 0.85
PDLIM3-212ENST00000620787 ENDOD1O94919 500 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 BAG2O95816 211 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 ATP5BP06576 529 aaKnown RBP20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 UBAP2LQ14157 1087 aaKnown RBP20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 ZNF699Q32M78 642 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 RAPH1Q70E73 1250 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 CAND1Q86VP6 1230 aaKnown RBP20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 EBF4Q9BQW3 602 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 CCDC28BQ9BUN5 200 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 XYLT2Q9H1B5 865 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 PCMTD2Q9NV79 361 aa20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 MAFBQ9Y5Q3 323 aaPredicted RBP20.33■□□□□ 0.85
PDLIM3-212ENST00000620787 RLFQ13129 1914 aa20.33■□□□□ 0.84
PDLIM3-212ENST00000620787 A0A088AWK7 358 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 TRDMT1O14717 391 aaKnown RBP20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 BPGMP07738 259 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 CSH1P0DML2 217 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 CSH2P0DML3 217 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 SP2Q02086 613 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 TRPC3Q13507 836 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 DUOXA2Q1HG44 320 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 APBB2Q92870 758 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 ZNF302Q9NR11 478 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 PAK5Q9P286 719 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 SCAF8Q9UPN6 1271 aaKnown RBP20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 LCTP09848 1927 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms