RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ADIGQ0VDE8 80 aa11.76□□□□□ -0.53
CLIP1-219ENST00000620786 PRAMEF19Q5SWL8 479 aa11.76□□□□□ -0.53
CLIP1-219ENST00000620786 IRAK1BP1Q5VVH5 260 aa11.76□□□□□ -0.53
CLIP1-219ENST00000620786 TAS1R2Q8TE23 839 aa11.76□□□□□ -0.53
CLIP1-219ENST00000620786 FAM136AQ96C01 138 aa11.76□□□□□ -0.53
CLIP1-219ENST00000620786 GID8Q9NWU2 228 aa11.76□□□□□ -0.53
CLIP1-219ENST00000620786 RUVBL2Q9Y230 463 aaKnown RBP11.76□□□□□ -0.53
CLIP1-219ENST00000620786 GUCA1CO95843 209 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CTNNB1P35222 781 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 SERPINB4P48594 390 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CHI3L2Q15782 390 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TFDP3Q5H9I0 405 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TJAP1Q5JTD0 557 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 LLGL2Q6P1M3 1020 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CACUL1Q86Y37 369 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 PALB2Q86YC2 1186 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 ERGIC2Q96RQ1 377 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 FRMD8Q9BZ67 464 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 LACTBL1A8MY62 500 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 UBXN8O00124 270 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 GPC1P35052 558 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 ACOX1Q15067 660 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CHMP1BQ7LBR1 199 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TFAP2DQ7Z6R9 452 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 NT5DC3Q86UY8 548 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 AHCYL2Q96HN2 611 aaKnown RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 FAM167BQ9BTA0 163 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 F8W810 466 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 APOA4P06727 396 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 FGFR1P11362 822 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 HDAC4P56524 1084 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 GUCY1A3Q02108 690 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CLEC4FQ8N1N0 589 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 RXFP2Q8WXD0 754 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TINF2Q9BSI4 451 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 IDI2Q9BXS1 227 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 IL25Q9H293 177 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 GGT7Q9UJ14 662 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 SEC23AQ15436 765 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 KYNUQ16719 465 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 SLC47A2Q86VL8 602 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 ABTB1Q969K4 478 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CNPY3Q9BT09 278 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TBC1D13Q9NVG8 400 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 PXDNQ92626 1479 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 AIM2O14862 343 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 DGKIO75912 1065 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 FAM107AO95990 144 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 PRIM2P49643 509 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 ANXA11P50995 505 aaKnown RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 MTA1Q13330 715 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TMED1Q13445 227 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 SLC13A5Q86YT5 568 aaPredicted RBP11.75□□□□□ -0.53
CLIP1-219ENST00000620786 RIOX2Q8IUF8 465 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 SHCBP1LQ9BZQ2 653 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 ATP13A1Q9HD20 1204 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 TSPAN16Q9UKR8 245 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 NFASCO94856 1347 aa11.75□□□□□ -0.53
CLIP1-219ENST00000620786 GLP2RO95838 553 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 OR1E1P30953 314 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 VSNL1P62760 191 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 RETSATQ6NUM9 610 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 NIPA1Q7RTP0 329 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 LGI2Q8N0V4 545 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 ZNF614Q8N883 585 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 SLC20A1Q8WUM9 679 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 ZNF558Q96NG5 402 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 RBBP8Q99708 897 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
CLIP1-219ENST00000620786 DRG1Q9Y295 367 aaKnown RBP11.74□□□□□ -0.53
CLIP1-219ENST00000620786 TCRBV5S4A2TA0A5A2 114 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 TRPC5OSA6NMA1 111 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 JCHAINP01591 159 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
CLIP1-219ENST00000620786 SERPINB8P50452 374 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 CXCL17Q6UXB2 119 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 TRMT11Q7Z4G4 463 aaKnown RBP11.74□□□□□ -0.53
CLIP1-219ENST00000620786 ZFPM1Q8IX07 1006 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 EMC1Q8N766 993 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.535e-7■■■■■ 48.1
CLIP1-219ENST00000620786 VMP1Q96GC9 406 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 CELF6Q96J87 481 aaKnown RBP11.74□□□□□ -0.53
CLIP1-219ENST00000620786 APOL2Q9BQE5 337 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 HTATIP2Q9BUP3 242 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 CDY2AQ9Y6F7 541 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 CDY1Q9Y6F8 540 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 SDR42E2A6NKP2 422 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 TBC1D4O60343 1298 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 PLA2G6O60733 806 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 MICAL2O94851 1124 aa11.74□□□□□ -0.53
CLIP1-219ENST00000620786 MAPTP10636 758 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms