RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ACTL9Q8TC94 416 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 PPP2R3CQ969Q6 453 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SLC39A10Q9ULF5 831 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 KRT16P08779 473 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 STAG3L1P0CL83 205 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 FECHP22830 423 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 EPHB2P29323 1055 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 HMOX2P30519 316 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SSTR1P30872 391 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 MTFR1Q15390 333 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 TAF1CQ15572 869 aaPredicted RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 PRUNE1Q86TP1 453 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ACOT1Q86TX2 421 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF75CPQ92670 426 aaPredicted RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 FOPNLQ96NB1 174 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 C10orf88Q9H8K7 445 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 GGA3Q9NZ52 723 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 C15orf41Q9Y2V0 281 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 PCDHAC2Q9Y5I4 1007 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 NUDT17P0C025 328 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SERPINB5P36952 375 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ELK3P41970 407 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 NUDT2P50583 147 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SPDYAQ5MJ70 313 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SDE2Q6IQ49 451 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 APTXQ7Z2E3 356 aaKnown RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 OTUB1Q96FW1 271 aaPredicted RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 BTBD10Q9BSF8 475 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ERVK-5Q9HDB9 667 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 BACE1P56817 501 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 PCSK7Q16549 785 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SLC25A41Q8N5S1 370 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 APOPT1Q96IL0 206 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 VCPIP1Q96JH7 1222 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 CNBD2Q96M20 576 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ATXN2Q99700 1313 aaKnown RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 AGPSO00116 658 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 TULP2O00295 520 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ANGPT2O15123 496 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 TGFB1I1O43294 461 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 AKAP10O43572 662 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SHOX2O60902 331 aaPredicted RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ATP9AO75110 1047 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 FMO1Q01740 532 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 OCA2Q04671 838 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 LAMTOR4Q0VGL1 99 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 INPP5AQ14642 412 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 NPY5RQ15761 445 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 KIZQ2M2Z5 673 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 FAM71AQ8IYT1 594 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 CERS5Q8N5B7 392 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 ZCWPW1Q9H0M4 648 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 IKZF4Q9H2S9 585 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SYTL2Q9HCH5 934 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 PDP2Q9P2J9 529 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 WARS2Q9UGM6 360 aaKnown RBP8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SUPT3HB4E1H0 165 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 SUPT3HO75486 399 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 MICAL2O94851 1124 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 PTGER2P43116 358 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 CLCN3P51790 818 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 UGP2Q16851 508 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 DACT2Q5SW24 774 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 FAM117BQ6P1L5 589 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 IPMKQ8NFU5 416 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 RXFP2Q8WXD0 754 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 EME1Q96AY2 570 aa8.63□□□□□ -1.03
ALMS1-208ENST00000620466 C5orf58C9J3I9 102 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SNX3O60493 162 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CBX6O95503 412 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SLC25A27O95847 323 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 TGM2P21980 687 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SERPINB8P50452 374 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 GRAMD4Q6IC98 578 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RRM2BQ7LG56 351 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ZBTB45Q96K62 511 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SLITRK1Q96PX8 696 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 LRRC19Q9H756 370 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 MED1Q15648 1581 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SDR42E2A6NKP2 422 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CXCL8P10145 99 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 GTF2BQ00403 316 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 MAMLD1Q13495 774 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ARHGEF7Q14155 803 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 TSPAN17Q96FV3 270 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 OXNAD1Q96HP4 312 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 VAV3Q9UKW4 847 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 DUOX1Q9NRD9 1551 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 MEI4A8MW99 385 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CDC42EP1Q00587 391 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 MGAT5BQ3V5L5 792 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 PDPK2PQ6A1A2 396 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 OR9Q1Q8NGQ5 310 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 PWWP2AQ96N64 755 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 DACH2Q96NX9 599 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 MTIF3Q9H2K0 278 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CHD2O14647 1828 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 M0QYT0 321 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms