RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 FAM50BQ9Y247 325 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 BACE2Q9Y5Z0 518 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 LOC400499M0QZD8 3231 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 LGALS16A8MUM7 142 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 TMEM189-UBE2V1I3L0A0 370 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 GABRDO14764 452 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 PTMAP06454 111 aaKnown RBP4.85□□□□□ -1.63
SYCP1-210ENST00000618516 CSH1P0DML2 217 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 CSH2P0DML3 217 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 RARGP13631 454 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 WARSP23381 471 aaKnown RBP4.85□□□□□ -1.63
SYCP1-210ENST00000618516 ATICP31939 592 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 CLCN1P35523 988 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 MTHFRP42898 656 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 KLHL30Q0D2K2 578 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 MRPL58Q14197 206 aaKnown RBP4.85□□□□□ -1.63
SYCP1-210ENST00000618516 LEXMQ3ZCV2 418 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 SH3PXD2AQ5TCZ1 1133 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 EMC10Q5UCC4 262 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 C15orf39Q6ZRI6 1047 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 TPRG1Q6ZUI0 275 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 ITIH5Q86UX2 942 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 SLC44A3Q8N4M1 653 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 LMO3Q8TAP4 145 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 SORCS1Q8WY21 1168 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 PSMG2Q969U7 264 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 CHFRQ96EP1 664 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 ASIC4Q96FT7 647 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 HINFPQ9BQA5 517 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 BCO2Q9BYV7 579 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 TRIM7Q9C029 511 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 GOLPH3Q9H4A6 298 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 FNIP2Q9P278 1114 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 CYTH4Q9UIA0 394 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 CDH7Q9ULB5 785 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 SH3BP1Q9Y3L3 701 aa4.85□□□□□ -1.63
SYCP1-210ENST00000618516 ZNF292O60281 2723 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 GOLGA6L7A0A1B0GV03 622 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 MACROD2A1Z1Q3 448 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 FAM47DPA6NHR8 397 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 WASH3PC4AMC7 463 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 O00370 1275 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 COCHO43405 550 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CYP11B1P15538 503 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 HMGA1P17096 107 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 EEF1GP26641 437 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PPP1R2P41236 205 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 STAT1P42224 750 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 AP3M2P53677 418 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 SNRPFP62306 86 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CT47A1Q5JQC4 288 aaPredicted RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 SYPL2Q5VXT5 272 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 BSPRYQ5W0U4 402 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TPGS2Q68CL5 300 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PDE12Q6L8Q7 609 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TXNDC11Q6PKC3 985 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 Q6ZS52 159 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TFAP2DQ7Z6R9 452 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 FAM131BQ86XD5 332 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 ADHFE1Q8IWW8 467 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PGBD3Q8N328 593 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 DEFB119Q8N690 84 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 ZNF653Q96CK0 615 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CFAP57Q96MR6 1250 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TRMT61BQ9BVS5 477 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CIPCQ9C0C6 399 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 HAUS4Q9H6D7 363 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 FAM204AQ9H8W3 233 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TDP1Q9NUW8 608 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 DDIT4Q9NX09 232 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PCSK1NQ9UHG2 260 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 EPG5Q9HCE0 2579 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 F8VZ95 297 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TADA3O75528 432 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 ZBED1O96006 694 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CYP11A1P05108 521 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TNFAIP3P21580 790 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 TBXAS1P24557 533 aaPredicted RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PON2Q15165 354 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 MAPRE1Q15691 268 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CCDC6Q16204 474 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 C15orf59Q2T9L4 293 aaPredicted RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 SMTNL2Q2TAL5 461 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 ZC3H12AQ5D1E8 599 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CDKAL1Q5VV42 579 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 PDXDC1Q6P996 788 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 DCUN1D2Q6PH85 259 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CMTM8Q8IZV2 173 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 DDI1Q8WTU0 396 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 GOLGA1Q92805 767 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 USP13Q92995 863 aaPredicted RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 CDCA3Q99618 268 aaPredicted RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 KIF9Q9HAQ2 790 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 FBRSL1Q9HCM7 1045 aaKnown RBP4.84□□□□□ -1.63
SYCP1-210ENST00000618516 SIX2Q9NPC8 291 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 DZANK1Q9NVP4 752 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 GPATCH2LQ9NWQ4 482 aa4.84□□□□□ -1.63
SYCP1-210ENST00000618516 ZDHHC7Q9NXF8 308 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms