RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TUBE1Q9UJT0 475 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 SNX8Q9Y5X2 465 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 RXRGP48443 463 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ERP27Q96DN0 273 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 A0A087WZ62 844 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 CARNS1A5YM72 827 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 PDZK1P1A8MUH7 402 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 TMEM114B3SHH9 223 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 MSH3P20585 1137 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 RENBPP51606 427 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 NFIAQ12857 509 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ARMCX4Q5H9R4 360 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 PAN2Q504Q3 1202 aaKnown RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ATAD3BQ5T9A4 648 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 FAM45BPQ6NSW5 357 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 DENND5BQ6ZUT9 1274 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 MTSS1LQ765P7 747 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 LRRC6Q86X45 466 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 RIN3Q8TB24 985 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 KLHL28Q9NXS3 571 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 KLK14Q9P0G3 267 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ENOPH1Q9UHY7 261 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF839A8K0R7 811 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 HOXC6P09630 235 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ATP6AP1LQ52LC2 224 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 C19orf18Q8NEA5 215 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF473Q8WTR7 871 aaKnown RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 SEC16BQ96JE7 1060 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 OXCT2Q9BYC2 517 aaPredicted RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 MYMKA6NI61 221 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 NCF1BA6NI72 391 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 NCF1CA8MVU1 366 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 GLRA3O75311 464 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SUPT7LO94864 414 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 NCF1P14598 390 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 TRIM28Q13263 835 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 ADGRA3Q8IWK6 1321 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 ERN1O75460 977 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 RINLQ6ZS11 566 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 CAMKK1Q8N5S9 505 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 ENGASEQ8NFI3 743 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 C9orf72Q96LT7 481 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SMAD5Q99717 465 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 BATF3Q9NR55 127 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 USP18Q9UMW8 372 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 GLP2RO95838 553 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 CLTBP09497 229 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 CNPP09543 421 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SLC26A2P50443 739 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SEL1L3Q68CR1 1132 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 COMMD2Q86X83 199 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SAC3D1A6NKF1 404 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 EIF3HO15372 352 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF24P17028 368 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SYTL1Q8IYJ3 562 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 SERPINB3P29508 390 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 NR1I3Q14994 352 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 LAYNQ6UX15 382 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 CHP1Q99653 195 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 B2RBV5 119 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 FCGR1AP12314 374 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 UQCRBP14927 111 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 CYP2A7P20853 494 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 TMEM51Q9NW97 253 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 FBXL21Q9UKT6 434 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 PAIP2BQ9ULR5 123 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 RHOCP08134 193 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 PABPC1P11940 636 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 FGFR2P21802 821 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 ADSSL1Q8N142 457 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 TARS2Q9BW92 718 aaKnown RBP11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 EFCAB1Q9HAE3 211 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 STARD13Q9Y3M8 1113 aa11.51□□□□□ -0.57
CCDC144B-208ENST00000618081 FAM220BPB1ANY3 271 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 FEN1P39748 380 aaKnown RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 KPNB1Q14974 876 aaKnown RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 MIB1Q86YT6 1006 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 B3GALNT2Q8NCR0 500 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 REPS1Q96D71 796 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 WHRNQ9P202 907 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 TMEM253P0C7T8 217 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 RANBP1P43487 201 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 VN1R5Q7Z5H4 357 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 SH3GL2Q99962 352 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms