RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 TERB1Q8NA31 727 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 EXD1Q8NHP7 514 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 PPP4R1Q8TF05 950 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 TRIM11Q96F44 468 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 FAM111AQ96PZ2 611 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 TDRD1Q9BXT4 1180 aaKnown RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 GBA3Q9H227 469 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 UBE2TQ9NPD8 197 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 INHBBP09529 407 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 C6orf222P0C671 652 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 NFKBIAP25963 317 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 RXRGP48443 463 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 HIF1AQ16665 826 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 SPTY2D1Q68D10 685 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 ACAD10Q6JQN1 1059 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 CDC42EP5Q6NZY7 148 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 CENPSQ8N2Z9 138 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 PPM1KQ8N3J5 372 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 GJA10Q969M2 543 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 TTC17Q96AE7 1141 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 PLEKHA8Q96JA3 519 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 CNBD2Q96M20 576 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 RUSC1Q9BVN2 902 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 ZNF341Q9BYN7 854 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 PCDH9Q9HC56 1237 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
CPEB1-215ENST00000617958 APPL1Q9UKG1 709 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
CPEB1-215ENST00000617958 FBXO21O94952 628 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 FUCA1P04066 466 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 GLRA2P23416 452 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 TNNI2P48788 182 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 SLC25A3Q00325 362 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 CBLBQ13191 982 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 EPC2Q52LR7 807 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 PRAMEF18Q5VWM3 479 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 STXBP4Q6ZWJ1 553 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 GPR180Q86V85 440 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ARID3BQ8IVW6 561 aaPredicted RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 CHERPQ8IWX8 916 aaKnown RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 TRIML2Q8N7C3 387 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ZNF420Q8TAQ5 688 aaPredicted RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 E2F7Q96AV8 911 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 CMTM5Q96DZ9 223 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ANKRD36BP1Q96IX9 119 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 PARVBQ9HBI1 364 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 RIMS3Q9UJD0 308 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 TRIM64BA6NI03 449 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 TBX3O15119 743 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 SULT1C4O75897 302 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 H6PDO95479 791 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 L1CAMP32004 1257 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 AQP5P55064 265 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 C21orf59P57076 290 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 BST1Q10588 318 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ZNF746Q6NUN9 644 aaPredicted RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 IYDQ6PHW0 289 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ARCQ7LC44 396 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 RHOT1Q8IXI2 618 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 HIPK3Q9H422 1215 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 DHX33Q9H6R0 707 aaKnown RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ATAD3AQ9NVI7 634 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 EPS15L1Q9UBC2 864 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 ANAPC7Q9UJX3 599 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
CPEB1-215ENST00000617958 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
CPEB1-215ENST00000617958 SPAG6O75602 509 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 SGPL1O95470 568 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 PSMC3P17980 439 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 NAT1P18440 290 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 ARSEP51690 589 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 ALDH18A1P54886 795 aaKnown RBP11.11□□□□□ -0.63
CPEB1-215ENST00000617958 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
CPEB1-215ENST00000617958 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
CPEB1-215ENST00000617958 TFDP1Q14186 410 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 AMIGO2Q86SJ2 522 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 CATSPER3Q86XQ3 398 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 POU5F2Q8N7G0 328 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 DLG3Q92796 817 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 ACAP3Q96P50 834 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 DOK1Q99704 481 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 DRC3Q9H069 523 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 SMYD3Q9H7B4 428 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 ALG13Q9NP73 1137 aaKnown RBP11.11□□□□□ -0.63
CPEB1-215ENST00000617958 SNX9Q9Y5X1 595 aa11.11□□□□□ -0.63
CPEB1-215ENST00000617958 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms