RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 CENPPQ6IPU0 288 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 C16orf89Q6UX73 402 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 C3orf62Q6ZUJ4 267 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 SYDE1Q6ZW31 735 aaPredicted RBP7.65□□□□□ -1.18
PDE6A-205ENST00000617647 AFAP1L2Q8N4X5 818 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 CCDC33Q8N5R6 958 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 METTL25Q8N6Q8 603 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 KCTD4Q8WVF5 259 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 HIPK3Q9H422 1215 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 KCNK4Q9NYG8 393 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 COQ3Q9NZJ6 369 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 IFT52Q9Y366 437 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 CEPT1Q9Y6K0 416 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 ROBO2Q9HCK4 1378 aa7.65□□□□□ -1.18
PDE6A-205ENST00000617647 ABCB11O95342 1321 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 PVALEFA0A1B0GWK0 134 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 EVPLLA8MZ36 301 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 CENPBD1B2RD01 187 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 H0YIN7 160 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 IRS4O14654 1257 aaPredicted RBP7.65□□□□□ -1.19
PDE6A-205ENST00000617647 TM9SF1O15321 606 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 TPST1O60507 370 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 TSPAN1O60635 241 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 TMEM191BP0C7N4 346 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF23P17027 643 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 ITIH1P19827 911 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 USP6P35125 1406 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 CYP2J2P51589 502 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 THOP1P52888 689 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 VAC14Q08AM6 782 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 ZFP69Q49AA0 526 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 KRT25Q7Z3Z0 450 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 GALNT7Q86SF2 657 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 RHPN2Q8IUC4 686 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 PDIK1LQ8N165 341 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 LRRC57Q8N9N7 239 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 LRRC20Q8TCA0 184 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 PTCD3Q96EY7 689 aaKnown RBP7.65□□□□□ -1.19
PDE6A-205ENST00000617647 C7orf25Q9BPX7 421 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 NEURL2Q9BR09 285 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 UQCC2Q9BRT2 126 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 AVENQ9NQS1 362 aaPredicted RBP7.65□□□□□ -1.19
PDE6A-205ENST00000617647 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.65□□□□□ -1.19
PDE6A-205ENST00000617647 SLC17A7Q9P2U7 560 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 PCYOX1Q9UHG3 505 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF221Q9UK13 617 aa7.65□□□□□ -1.19
PDE6A-205ENST00000617647 A0A0A6YYK5 440 aaPredicted RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SAC3D1A6NKF1 404 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 M0QX08 132 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 NFIBO00712 420 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 PRKAB2O43741 272 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 UQCRFS1P1P0C7P4 283 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 LRPAP1P30533 357 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SEPHS1P49903 392 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 DEFA1P59665 94 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 DEFA3P59666 94 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SNX17Q15036 470 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 HIF1AQ16665 826 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SIGIRRQ6IA17 410 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 ZCCHC8Q6NZY4 707 aaKnown RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 BNC2Q6ZN30 1099 aaPredicted RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 TMEM26Q6ZUK4 368 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 MARVELD2Q8N4S9 558 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 KIAA0895Q8NCT3 520 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 BHLHE22Q8NFJ8 381 aaPredicted RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 ALG3Q92685 438 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 KCNN1Q92952 543 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 DMRTB1Q96MA1 342 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 ZSCAN5AQ9BUG6 496 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 MFRPQ9BY79 579 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 VPS11Q9H270 941 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 TOR3AQ9H497 397 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 TMEM206Q9H813 350 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SP140LQ9H930 580 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SLC38A10Q9HBR0 1119 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 NEK6Q9HC98 313 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 KBTBD4Q9NVX7 518 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 RAB20Q9NX57 234 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 KLHL3Q9UH77 587 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 FLT4P35916 1363 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 FOXP2O15409 715 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SOX5P35711 763 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 MARCKSL1P49006 195 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 PKNOX1P55347 436 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 CD300CQ08708 224 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 ASTE1Q2TB18 679 aaPredicted RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 PLD3Q8IV08 490 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 NATD1Q8N6N6 113 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 ASCC1Q8N9N2 400 aaKnown RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 FAM217BQ9NTX9 383 aaPredicted RBP7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SNTG2Q9NY99 539 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 COPG2Q9UBF2 871 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 ANAPC7Q9UJX3 599 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 SLC8A2Q9UPR5 921 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 FMN2Q9NZ56 1722 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 LAD1O00515 517 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 NEMP1O14524 444 aa7.64□□□□□ -1.19
PDE6A-205ENST00000617647 HSPA4LO95757 839 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms