RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 RPS6KA5O75582 802 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 UCHL3P15374 230 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ITGALP20701 1170 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 HNMTP50135 292 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 CCNG1P51959 295 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 EXOSC10Q01780 885 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 GRIK3Q13003 919 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ZNF177Q13360 481 aaPredicted RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 TAB1Q15750 504 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 SAPCD2Q86UD0 394 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 MTDHQ86UE4 582 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 CAPSLQ8WWF8 208 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ELP3Q9H9T3 547 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ENTPD7Q9NQZ7 604 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ANAPC2Q9UJX6 822 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 SF3B1O75533 1304 aaKnown RBP eCLIP6.19□□□□□ -1.425e-6■■■■■ 81.3
RFX3-212ENST00000617270 CCNT2O60583 730 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 KATNA1O75449 491 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 EYA4O95677 639 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 FGFR1P11362 822 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 DGCR6Q14129 220 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 SV2CQ496J9 727 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ALKBH2Q6NS38 261 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 RD3Q7Z3Z2 195 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 NT5DC3Q86UY8 548 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 KBTBD2Q8IY47 623 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 PRCCQ92733 491 aaPredicted RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 MASTLQ96GX5 879 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 REEP2Q9BRK0 252 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 UBE2OQ9C0C9 1292 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 PLEKHG1Q9ULL1 1385 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 PLA2G6O60733 806 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 TRIM3O75382 744 aaPredicted RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 NQO1P15559 274 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 HNRNPH1P31943 449 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 GTF2H1P32780 548 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 TGM3Q08188 693 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 NAIF1Q69YI7 327 aaPredicted RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 TDRD5Q8NAT2 981 aaKnown RBP6.19□□□□□ -1.42
RFX3-212ENST00000617270 VPS33AQ96AX1 596 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 SPACA7Q96KW9 195 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 TMEM120AQ9BXJ8 343 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 ACTR8Q9H981 624 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 COPG2Q9UBF2 871 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 TAGLN3Q9UI15 199 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 DNAJC16Q9Y2G8 782 aa6.19□□□□□ -1.42
RFX3-212ENST00000617270 PDE9AO76083 593 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 FCGR1AP12314 374 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CENPCQ03188 943 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 TRAF3Q13114 568 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 OLFML2AQ68BL7 652 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 LDHDQ86WU2 507 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 FAM129BQ96TA1 746 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 LY9Q9HBG7 655 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ING3Q9NXR8 418 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 LNPEPQ9UIQ6 1025 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 VPS28Q9UK41 221 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 DNMBPQ6XZF7 1577 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 LOC100506127A0A0U1RQW1 187 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SH3BGRLO75368 114 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 DGAT1O75907 488 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 MBL2P11226 248 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 PLA2G4FQ68DD2 849 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ESRP1Q6NXG1 681 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 TAF2Q6P1X5 1199 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 C3orf20Q8ND61 904 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 APOL2Q9BQE5 337 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ELL3Q9HB65 397 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 DDIT4Q9NX09 232 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 PIM2Q9P1W9 311 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 PRODHO43272 600 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 TIMM44O43615 452 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RNASEH1O60930 286 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 GUCY1B2O75343 617 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 OR6A2O95222 327 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 NPTXRO95502 500 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SLC2A4P14672 509 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RCVRNP35243 200 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ACADSBP45954 432 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 NR6A1Q15406 480 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 TDRD10Q5VZ19 366 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 GLB1LQ6UWU2 654 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ISLR2Q6UXK2 745 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 DSG4Q86SJ6 1040 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SYNE4Q8N205 404 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SEPT1Q8WYJ6 367 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SERAC1Q96JX3 654 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 DCP1AQ9NPI6 582 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 COMMD8Q9NX08 183 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RNF181Q9P0P0 153 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SH3BP4Q9P0V3 963 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 UBA2Q9UBT2 640 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 EFR3BQ9Y2G0 817 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 WDR19Q8NEZ3 1342 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RRN3P2A6NIE6 340 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 DYNC1LI2O43237 492 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 MTSS1O43312 755 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 GLRA3O75311 464 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 OXCT1P55809 520 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms