RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CHST12Q9NRB3 414 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.98■□□□□ 0.79
MMP28-204ENST00000615136 RABGGTBP53611 331 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 ATXN1P54253 815 aaKnown RBP19.98■□□□□ 0.79
MMP28-204ENST00000615136 LPIN1Q14693 890 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 P3H1Q32P28 736 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 CCDC38Q502W7 563 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 RNF187Q5TA31 235 aaPredicted RBP19.98■□□□□ 0.79
MMP28-204ENST00000615136 PAQR9Q6ZVX9 377 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 BBS12Q6ZW61 710 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 ZCCHC9Q8N567 271 aaKnown RBP19.98■□□□□ 0.79
MMP28-204ENST00000615136 RNF169Q8NCN4 708 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 FAM172AQ8WUF8 416 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 ARHGEF2Q92974 986 aaKnown RBP19.98■□□□□ 0.79
MMP28-204ENST00000615136 LGALS13Q9UHV8 139 aa19.98■□□□□ 0.79
MMP28-204ENST00000615136 CASTOR2A6NHX0 329 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 DPYSL4O14531 572 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 TRPA1O75762 1119 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 CST5P28325 142 aaPredicted RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 ARSEP51690 589 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 GDF10P55107 478 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 ZC3H12AQ5D1E8 599 aaKnown RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 SCYL2Q6P3W7 929 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 RFX6Q8HWS3 928 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 NKD2Q969F2 451 aaPredicted RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 SENP8Q96LD8 212 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 MAGEB5Q9BZ81 275 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 TMEM51Q9NW97 253 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 DNALI1O14645 258 aaPredicted RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 GPR182O15218 404 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 ENDOD1O94919 500 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 THP07101 528 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 ABHD2P08910 425 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 RPL34P49207 117 aaKnown RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 CDH6P55285 790 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 PLCB3Q01970 1234 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 ITGA7Q13683 1181 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 CA9Q16790 459 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 MAP3K21Q5TCX8 1036 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 NPNTQ6UXI9 565 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 CCDC121Q6ZUS5 278 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 P3H4Q92791 437 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 PRMT1Q99873 361 aaKnown RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 SRRDQ9UH36 339 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 DRG1Q9Y295 367 aaKnown RBP19.97■□□□□ 0.79
MMP28-204ENST00000615136 EFR3BQ9Y2G0 817 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 CAPN7Q9Y6W3 813 aa19.97■□□□□ 0.79
MMP28-204ENST00000615136 GABRDO14764 452 aa19.96■□□□□ 0.79
MMP28-204ENST00000615136 HDAC4P56524 1084 aa19.96■□□□□ 0.79
MMP28-204ENST00000615136 ACTN3Q08043 901 aaPredicted RBP19.96■□□□□ 0.79
MMP28-204ENST00000615136 DPYSL3Q14195 570 aa19.96■□□□□ 0.79
MMP28-204ENST00000615136 TRIM71Q2Q1W2 868 aaKnown RBP19.96■□□□□ 0.79
MMP28-204ENST00000615136 VSTM1Q6UX27 236 aa19.96■□□□□ 0.79
MMP28-204ENST00000615136 CNPY4Q8N129 248 aa19.96■□□□□ 0.79
MMP28-204ENST00000615136 ACTR5Q9H9F9 607 aaPredicted RBP19.96■□□□□ 0.79
MMP28-204ENST00000615136 I3L4J1 428 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 PRPSAP2O60256 369 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 PTPN1P18031 435 aaKnown RBP19.95■□□□□ 0.78
MMP28-204ENST00000615136 SDC4P31431 198 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 NRLP54845 237 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 DSC3Q14574 896 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 DEFB115Q30KQ5 88 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 PIGWQ7Z7B1 504 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 MRPL10Q7Z7H8 261 aaKnown RBP19.95■□□□□ 0.78
MMP28-204ENST00000615136 PIGZQ86VD9 579 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 LRRC34Q8IZ02 419 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 TNIP3Q96KP6 325 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 CRTAC1Q9NQ79 661 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 EURLQ9NYK6 297 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 CTNNAL1Q9UBT7 734 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 TOMM70O94826 608 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 POMCP01189 267 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 IFNB1P01574 187 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 ITGAVP06756 1048 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 IL4RP24394 825 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 STAT4Q14765 748 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
MMP28-204ENST00000615136 MDH1BQ5I0G3 518 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 RBM15Q96T37 977 aaKnown RBP eCLIP19.95■□□□□ 0.78
MMP28-204ENST00000615136 HNRNPABQ99729 332 aaKnown RBP19.95■□□□□ 0.78
MMP28-204ENST00000615136 C11orf84Q9BUA3 381 aaPredicted RBP19.95■□□□□ 0.78
MMP28-204ENST00000615136 SLC38A7Q9NVC3 462 aa19.95■□□□□ 0.78
MMP28-204ENST00000615136 DDX43Q9NXZ2 648 aaKnown RBP19.95■□□□□ 0.78
MMP28-204ENST00000615136 TMEM120BA0PK00 339 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 SGK1O00141 431 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 CDH16O75309 829 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 ACLYP53396 1101 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 GPS1Q13098 491 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 LACTB2Q53H82 288 aaPredicted RBP19.94■□□□□ 0.78
MMP28-204ENST00000615136 SLC26A9Q7LBE3 791 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 CCDC197Q8NCU1 140 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 ADAM2Q99965 735 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 SNRNP25Q9BV90 132 aaKnown RBP19.94■□□□□ 0.78
MMP28-204ENST00000615136 GIT1Q9Y2X7 761 aa19.94■□□□□ 0.78
MMP28-204ENST00000615136 NDUFV1P49821 464 aa19.93■□□□□ 0.78
MMP28-204ENST00000615136 ITIH4Q14624 930 aa19.93■□□□□ 0.78
MMP28-204ENST00000615136 ANKRD20A8PQ5CZ79 823 aa19.93■□□□□ 0.78
MMP28-204ENST00000615136 ZDHHC17Q8IUH5 632 aa19.93■□□□□ 0.78
MMP28-204ENST00000615136 CCDC13Q8IYE1 715 aa19.93■□□□□ 0.78
MMP28-204ENST00000615136 PCSK9Q8NBP7 692 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms