RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	VPS13A	Q96RL7	3174 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	TECTA	O75443	2155 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	CTAGE15	A4D2H0	777 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	LINC01553	A4QN01	128 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	DPYSL4	O14531	572 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	TRAPPC3	O43617	180 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	GFRA3	O60609	400 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	EFCAB14	O75071	495 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	LRCH4	O75427	683 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	GRAP2	O75791	330 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	AP1G2	O75843	785 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	VNN2	O95498	520 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	AMH	P03971	560 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	OR4Q2	P0C623	313 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	CTAGE8	P0CG41	777 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	PYGM	P11217	842 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	LCP1	P13796	627 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	BDNF	P23560	247 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	PSMA2	P25787	234 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	NDUFV1	P49821	464 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	MAP3K7CL	P57077	242 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	RNASE9	P60153	205 aa	Known RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	SLC25A11	Q02978	314 aa	Known RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	C2orf54	Q08AI8	447 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ADIG	Q0VDE8	80 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	TCF15	Q12870	199 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	CFAP221	Q4G0U5	840 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ATP13A4	Q4VNC1	1196 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	TEX35	Q5T0J7	233 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	SH3PXD2A	Q5TCZ1	1133 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	SLC26A9	Q7LBE3	791 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ARC	Q7LC44	396 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	BHLHA9	Q7RTU4	235 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ANKS1B	Q7Z6G8	1248 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	CTAGE6	Q86UF2	777 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ZDHHC17	Q8IUH5	632 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	CTAGE4	Q8IX94	777 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	MMGT1	Q8N4V1	131 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	UBL4B	Q8N7F7	174 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	SPATA4	Q8NEY3	305 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	RXFP2	Q8WXD0	754 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	NDRG1	Q92597	394 aa	Known RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	PABPC5	Q96DU9	382 aa	Known RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	MRPL38	Q96DV4	380 aa	Known RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	SMARCD1	Q96GM5	515 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	RPGRIP1	Q96KN7	1286 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	RAD9A	Q99638	391 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	HERPUD2	Q9BSE4	406 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ADAM33	Q9BZ11	813 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	UBXN6	Q9BZV1	441 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	MIS12	Q9H081	205 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	EPC1	Q9H2F5	836 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	RBM12	Q9NTZ6	932 aa	Known RBP	7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	LCMT1	Q9UIC8	334 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	UST	Q9Y2C2	406 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	NR2E1	Q9Y466	385 aa		7.69	□□□□□ -1.18
PVT1-222	ENST00000613916	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	HELZ	P42694	1942 aa	Known RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	TCRBV7S2A1N4T	A0A589	114 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916		H3BQ06	376 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	PGRMC1	O00264	195 aa	Known RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	DYNC1I1	O14576	645 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	TNFRSF10B	O14763	440 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	PSTPIP1	O43586	416 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	FYN	P06241	537 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	LINC00271	P0C7V0	271 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	TFE3	P19532	575 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	GPD1	P21695	349 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	IL1R2	P27930	398 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	PAFAH1B1	P43034	410 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	TKTL1	P51854	596 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	ZNF143	P52747	638 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	RWDD2B	P57060	319 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	SNX16	P57768	344 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	DAOA	P59103	153 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	HTRA4	P83105	476 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	TSPY1	Q01534	308 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	ELAVL2	Q12926	359 aa	Known RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	ACAP1	Q15027	740 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	SIX1	Q15475	284 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	MAPRE1	Q15691	268 aa	Known RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	ELF2	Q15723	593 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	C15orf59	Q2T9L4	293 aa	Predicted RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	CCDC14	Q49A88	953 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	SLC39A12	Q504Y0	691 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	RTP2	Q5QGT7	225 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	IER5L	Q5T953	404 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	LRRC38	Q5VT99	294 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	FAM117B	Q6P1L5	589 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	KCNT2	Q6UVM3	1135 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	ERMP1	Q7Z2K6	904 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	RHOT1	Q8IXI2	618 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	CMTR2	Q8IYT2	770 aa	Known RBP	7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	KATNAL2	Q8IYT4	538 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	SLC39A11	Q8N1S5	342 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	UBXN4	Q92575	508 aa		7.68	□□□□□ -1.18
PVT1-222	ENST00000613916	CENPI	Q92674	756 aa	Predicted RBP	7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms