RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 GCNT4Q9P109 453 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 RALBP11234 206 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ALADP13716 330 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FMR1Q06787 632 aaKnown RBP eCLIP5.11□□□□□ -1.591e-6■■■■□ 25.4
VPS13D-213ENST00000613099 NECTIN1Q15223 517 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SPOPLQ6IQ16 392 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FANCBQ8NB91 859 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 TCEAL3Q969E4 200 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 TP53INP1Q96A56 240 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SLC4A5Q9BY07 1137 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 CATSPERZQ9NTU4 200 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FAM105AQ9NUU6 356 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 GAKO14976 1311 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ECDO95905 644 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF3P17036 446 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 TMEM214Q6NUQ4 689 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SIRT2Q8IXJ6 389 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 DHRSXQ8N5I4 330 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 TPCN2Q8NHX9 752 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 YKT6O15498 198 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 PRKCQQ04759 706 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 PHC2Q8IXK0 858 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SLC13A1Q9BZW2 595 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FAM196BA6NMK8 535 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 RRM2P31350 389 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 CAPRIN1Q14444 709 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SAMD4BQ5PRF9 694 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 TTC39BQ5VTQ0 682 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 GPR107Q5VW38 600 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ARMC8Q8IUR7 673 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ILKAPQ9H0C8 392 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 RMND5AQ9H871 391 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SLC39A1Q9NY26 324 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 EHD3Q9NZN3 535 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF879B4DU55 563 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 CLPXO76031 633 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 GJB6O95452 261 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 APOA4P06727 396 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 POLR2BP30876 1174 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SLC26A3P40879 764 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FXR1P51114 621 aaKnown RBP eCLIP5.11□□□□□ -1.592e-6■■■□□ 15.7
VPS13D-213ENST00000613099 ACLYP53396 1101 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 YARSP54577 528 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 EIF3MQ7L2H7 374 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 OR8H3Q8N146 312 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 C18orf8Q96DM3 657 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 GTPBP2Q9BX10 602 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 KCNE2Q9Y6J6 123 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 CEP170BQ9Y4F5 1589 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC154A6NI56 674 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 TOP3BO95985 862 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SPDYAQ5MJ70 313 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FRMD7Q6ZUT3 714 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 CYB5R4Q7L1T6 521 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 NLRP10Q86W26 655 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 METTL16Q86W50 562 aaKnown RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 RCOR2Q8IZ40 523 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ARL5BQ96KC2 179 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ATP5OP48047 213 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 S100A12P80511 92 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FAM76BQ5HYJ3 339 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 RAPH1Q70E73 1250 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 PQLC1Q8N2U9 271 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 LILRB4Q8NHJ6 448 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF420Q8TAQ5 688 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-213ENST00000613099 SLC30A1Q9Y6M5 507 aa5.11□□□□□ -1.59
VPS13D-213ENST00000613099 FAM83GA6ND36 823 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CDK16Q00536 496 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CENPCQ03188 943 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 EZH2Q15910 746 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 UGP2Q16851 508 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 FANCFQ9NPI8 374 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PRDM11Q9NQV5 511 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SNTG2Q9NY99 539 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TNPO2O14787 897 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 AQP5P55064 265 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 GMFBP60983 142 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 DARS2Q6PI48 645 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 GRAMD2AQ8IUY3 354 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 DEFB107AQ8IZN7 70 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SETD9Q8NE22 299 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CLHC1Q8NHS4 586 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 XAGE2Q96GT9 111 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 RNMTO43148 476 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TMC7Q7Z402 723 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 APPL2Q8NEU8 664 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 FAM45AQ8TCE6 357 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF507Q8TCN5 953 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TMA16Q96EY4 203 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TLR10Q9BXR5 811 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CYP4F12Q9HCS2 524 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ARMC1Q9NVT9 282 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 DENND2AQ9ULE3 1009 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PLAGL2Q9UPG8 496 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 KIF28PB7ZC32 967 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PRKAR1BP31321 381 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PSMD4P55036 377 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TRIM71Q2Q1W2 868 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 IZUMO3Q5VZ72 239 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ERAP2Q6P179 960 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms