RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 POPDC2Q9HBU9 364 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 IL23AQ9NPF7 189 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 PRDM10Q9NQV6 1147 aa12.87□□□□□ -0.35
CBWD1-220ENST00000612045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 ABI2Q9NYB9 513 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-220ENST00000612045 YJEFN3A6XGL0 299 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 E7ENQ6 273 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 H7C4K7 107 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 TBC1D4O60343 1298 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 EFEMP2O95967 443 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 KRT10P13645 584 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 KDELR1P24390 212 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 NOS2P35228 1153 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 CDKN2BP42772 138 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 GUCY2DQ02846 1103 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 SLC25A52Q3SY17 297 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 BOLA3Q53S33 107 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 DCAF6Q58WW2 860 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 TFDP3Q5H9I0 405 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 SCYL2Q6P3W7 929 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 HFE2Q6ZVN8 426 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 HSPH1Q92598 858 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 NT5C3BQ969T7 300 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 IGSF21Q96ID5 467 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 TBCBQ99426 244 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 LRRC19Q9H756 370 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 PCYOX1Q9UHG3 505 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 PCDHB5Q9Y5E4 795 aa12.86□□□□□ -0.35
CBWD1-220ENST00000612045 hCG_1818297A0A087WSY0 165 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TTI1O43156 1089 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 ERLIN1O75477 346 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TJP3O95049 919 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 FYNP06241 537 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TAZQ16635 292 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 SPOUT1Q5T280 376 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 KAZNQ674X7 775 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 PM20D1Q6GTS8 502 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TTC27Q6P3X3 843 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 CCDC137Q6PK04 289 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 KCNT2Q6UVM3 1135 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 VSTM1Q6UX27 236 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 RSPO2Q6UXX9 243 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 CCNI2Q6ZMN8 369 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 ANKS3Q6ZW76 656 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 C16orf59Q7L2K0 433 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 STRADAQ7RTN6 431 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 OTOP2Q7RTS6 562 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 BHLHA9Q7RTU4 235 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 HNRNPLLQ8WVV9 542 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 C1orf54Q8WWF1 131 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 IRGQQ8WZA9 623 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 GDF3Q9NR23 364 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 PRKAG2Q9UGJ0 569 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 ZSCAN5CA6NGD5 496 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 CD48P09326 243 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 FNTAP49354 379 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 SULT1E1P49888 294 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 ATXN1P54253 815 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 DR1Q01658 176 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 DHX34Q14147 1143 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 BTG3Q14201 252 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 SYPL2Q5VXT5 272 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TMCO3Q6UWJ1 677 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 CMTR2Q8IYT2 770 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 SCML4Q8N228 414 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 SCAMP5Q8TAC9 235 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 TEKT4Q8WW24 435 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 RUNDC3BQ96NL0 473 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 PGLYRP2Q96PD5 576 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 EPB41L5Q9HCM4 733 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 NAALADL1Q9UQQ1 740 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 R3HDM2Q9Y2K5 976 aaKnown RBP12.85□□□□□ -0.35
CBWD1-220ENST00000612045 PATJQ8NI35 1801 aa12.85□□□□□ -0.35
CBWD1-220ENST00000612045 ESYT3A0FGR9 886 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 CAPN9O14815 690 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 MDM4O15151 490 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ENDOD1O94919 500 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 LTFP02788 710 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 CPB1P15086 417 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 TNFRSF8P28908 595 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms