RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 EZH1Q92800 747 aaPredicted RBP23.02■■□□□ 1.28
CBWD3-207ENST00000611426 SMARCD1Q96GM5 515 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 CHORDC1Q9UHD1 332 aaPredicted RBP23.02■■□□□ 1.28
CBWD3-207ENST00000611426 TRAF3IP3Q9Y228 551 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.02■■□□□ 1.28
CBWD3-207ENST00000611426 RALGAPA1Q6GYQ0 2036 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 MED19A0JLT2 244 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-207ENST00000611426 SLC9A3R1O14745 358 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-207ENST00000611426 MBL2P11226 248 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-207ENST00000611426 ATP1A3P13637 1013 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 SYT13Q7L8C5 426 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 CACNA2D4Q7Z3S7 1137 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 ADGRG2Q8IZP9 1017 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 CCDC26Q8TAB7 109 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 SCAMP5Q8TAC9 235 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 OVCA2Q8WZ82 227 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 HHIPQ96QV1 700 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 DMAP1Q9NPF5 467 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-207ENST00000611426 CFAP97Q9P2B7 532 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 CBFA2T2O43439 604 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 AP1G2O75843 785 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 VAMP7P51809 220 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 ORC1Q13415 861 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 CSRP2Q16527 193 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 DDX42Q86XP3 938 aaKnown RBP eCLIP23.01■■□□□ 1.27
CBWD3-207ENST00000611426 FUKQ8N0W3 1084 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 ACDQ96AP0 544 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 MAPK8IP1Q9UQF2 711 aa23.01■■□□□ 1.27
CBWD3-207ENST00000611426 SDK1Q7Z5N4 2213 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 LRRC10BA6NIK2 292 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 TNFRSF10BO14763 440 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 SCAMP3O14828 347 aaKnown RBP23■■□□□ 1.27
CBWD3-207ENST00000611426 AXIN1O15169 862 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 MAPK13O15264 365 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 ASS1P00966 412 aaKnown RBP23■■□□□ 1.27
CBWD3-207ENST00000611426 NR2F2P24468 414 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 OPRD1P41143 372 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 PIK3CAP42336 1068 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 NDST1P52848 882 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 SLC5A3P53794 718 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 LRRC63Q05C16 580 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 DMC1Q14565 340 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 C1orf220Q5T0J3 134 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 SPOPLQ6IQ16 392 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 CRYBG2Q8N1P7 616 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 RTKNQ9BST9 563 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 THAP9Q9H5L6 903 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 KRT82Q9NSB4 513 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 SAMSN1Q9NSI8 373 aaKnown RBP23■■□□□ 1.27
CBWD3-207ENST00000611426 COMMD8Q9NX08 183 aa23■■□□□ 1.27
CBWD3-207ENST00000611426 HLA-DRAP01903 254 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 CYP17A1P05093 508 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 CCDC130P13994 396 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 STX17P56962 302 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 DHCR24Q15392 516 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 HECTD3Q5T447 861 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 PRR23CQ6ZRP0 262 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 INTS8Q75QN2 995 aaKnown RBP22.99■■□□□ 1.27
CBWD3-207ENST00000611426 APTXQ7Z2E3 356 aaKnown RBP22.99■■□□□ 1.27
CBWD3-207ENST00000611426 UNC93AQ86WB7 457 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 SLC2A14Q8TDB8 520 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.99■■□□□ 1.27
CBWD3-207ENST00000611426 IL37Q9NZH6 218 aa22.99■■□□□ 1.27
CBWD3-207ENST00000611426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.98■■□□□ 1.27
CBWD3-207ENST00000611426 GOLGA6L6A8MZA4 724 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 COCHO43405 550 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 AKAP3O75969 853 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 APBB3O95704 486 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 TPM3P06753 285 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 KRT13P13646 458 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 TRIM21P19474 475 aaKnown RBP22.98■■□□□ 1.27
CBWD3-207ENST00000611426 RPL13P26373 211 aaKnown RBP22.98■■□□□ 1.27
CBWD3-207ENST00000611426 ASPAP45381 313 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 SEC13P55735 322 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 NFIL3Q16649 462 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 GAB4Q2WGN9 574 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 ZCWPW2Q504Y3 356 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 C2orf27AQ580R0 203 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 SNX30Q5VWJ9 437 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 KBTBD6Q86V97 674 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 LOXL4Q96JB6 756 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 SMOQ99835 787 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 DUSP9Q99956 384 aaKnown RBP22.98■■□□□ 1.27
CBWD3-207ENST00000611426 IMPG2Q9BZV3 1241 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 XPO4Q9C0E2 1151 aaKnown RBP22.98■■□□□ 1.27
CBWD3-207ENST00000611426 IFNKQ9P0W0 207 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 TBC1D14Q9P2M4 693 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 HMGXB4Q9UGU5 601 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 LIMA1Q9UHB6 759 aaKnown RBP22.98■■□□□ 1.27
CBWD3-207ENST00000611426 SPAG17Q6Q759 2223 aa22.98■■□□□ 1.27
CBWD3-207ENST00000611426 MYO16Q9Y6X6 1858 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 MYH10P35580 1976 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 K7EQS6 105 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 FOXD2O60548 495 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-207ENST00000611426 BEST1O76090 585 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 TRIM49P0CI25 452 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 TRIM49CP0CI26 452 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 GCLMP48507 274 aa22.97■■□□□ 1.27
CBWD3-207ENST00000611426 PMS1P54277 932 aaKnown RBP22.97■■□□□ 1.27
CBWD3-207ENST00000611426 MAP3K7CLP57077 242 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms